Detailed information    

insolico Bioinformatically predicted

Overview

Name   recP/tkt   Type   Machinery gene
Locus tag   NUT86_RS11060 Genome accession   NZ_CP102609
Coordinates   2701760..2703862 (+) Length   700 a.a.
NCBI ID   WP_274734885.1    Uniprot ID   A0ABY7JC83
Organism   Streptomyces sp. G7(2002)     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2696760..2708862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NUT86_RS11035 (NUT86_11050) - 2696845..2697651 (+) 807 WP_274734880.1 ABC transporter permease -
  NUT86_RS11040 (NUT86_11055) - 2697739..2698743 (+) 1005 WP_274734882.1 COX15/CtaA family protein -
  NUT86_RS11045 (NUT86_11060) - 2698716..2699780 (-) 1065 WP_093642781.1 amidohydrolase -
  NUT86_RS11050 (NUT86_11065) - 2699924..2700304 (-) 381 WP_018091866.1 hypothetical protein -
  NUT86_RS11055 (NUT86_11070) - 2700351..2701301 (-) 951 WP_229838578.1 heme o synthase -
  NUT86_RS11060 (NUT86_11075) recP/tkt 2701760..2703862 (+) 2103 WP_274734885.1 transketolase Machinery gene
  NUT86_RS11065 (NUT86_11080) tal 2703897..2705015 (+) 1119 WP_018091869.1 transaldolase -
  NUT86_RS11070 (NUT86_11085) zwf 2705022..2706554 (+) 1533 WP_018091870.1 glucose-6-phosphate dehydrogenase -
  NUT86_RS11075 (NUT86_11090) opcA 2706551..2707594 (+) 1044 WP_274734888.1 glucose-6-phosphate dehydrogenase assembly protein OpcA -
  NUT86_RS11080 (NUT86_11095) pgl 2707591..2708373 (+) 783 WP_020397758.1 6-phosphogluconolactonase -

Sequence

Protein


Download         Length: 700 a.a.        Molecular weight: 75304.14 Da        Isoelectric Point: 5.0024

>NTDB_id=617513 NUT86_RS11060 WP_274734885.1 2701760..2703862(+) (recP/tkt) [Streptomyces sp. G7(2002)]
MSTKPTTTDLEWTELDQRAVDTVRVLAMDSVQKVGNGHPGTAMSLAPAAYLLFQKLMRHDPADANWTGRDRFVLSAGHSS
LTLYIQLYLAGYGLELDDLKAFRTWGSKTPGHPEYGHTTGVETTTGPLGQGVANAVGMAMASRYERGLFDPEAAQGTSPF
DHTIFCIAGDGCLQEGISAEASSLAGHQKLGNLVLLWDDNHISIEGDTETAVSEDTLKRYEAYGWHVQRVAQLPNGDLDP
AGLARAIEAAKAETERPSFIAMRSIIAWPAPNAQNTEAAHGSALGDEEVAATKRVLGFDPEKSFEVSDEVLAHTRAALDR
GRDTKKEWEKSFADWRAANTERAAEFDRIAAGELPAGWEDHLPSFETGKAVATRAASGKVLHALGAVIPELWGGSADLAG
SNNTTIDKTSSFLPEGNPLPGADPYGRTIHFGIREHSMAAEMNGIALHGNTRIYGGTFLVFSDYMRNAVRLSALMHLPVT
YVWTHDSIGLGEDGPTHQPIEHLASLRAIPGLNIVRPADANETAIAWREILRRYTKEYGVGAPHGLALTRQGVPTYPANE
ATAKGGYVLFDAAGPEGQDAEPQVVLIGTGSEVQLAVEAREQLQAEGIPTRVVSMPSVEWFDQQDQAYRDSVLPPSVRAR
VAVEAGIGLTWHRFVGDAGRIVSLEHFGASADGKVLFREFGFTADAVASAARESLEAAAR

Nucleotide


Download         Length: 2103 bp        

>NTDB_id=617513 NUT86_RS11060 WP_274734885.1 2701760..2703862(+) (recP/tkt) [Streptomyces sp. G7(2002)]
GTGAGCACCAAGCCGACCACCACAGATCTCGAGTGGACCGAACTGGATCAGCGGGCAGTGGATACCGTCCGTGTCCTGGC
CATGGATTCCGTGCAGAAGGTCGGTAACGGCCATCCCGGTACGGCCATGAGCCTGGCGCCGGCCGCCTACCTTCTCTTCC
AGAAGCTGATGCGGCACGACCCGGCGGACGCGAACTGGACCGGCCGCGACCGGTTCGTCCTCTCCGCGGGCCACTCCAGC
CTGACCCTCTACATCCAGCTCTACCTCGCCGGTTACGGCCTGGAGCTGGACGACCTGAAGGCGTTCCGCACCTGGGGCTC
GAAGACCCCGGGCCACCCCGAGTACGGCCACACCACCGGCGTGGAGACCACCACGGGTCCGCTGGGCCAGGGTGTCGCCA
ACGCGGTCGGCATGGCGATGGCGTCGCGCTACGAGCGCGGCCTGTTCGACCCCGAGGCGGCCCAGGGCACCTCGCCCTTC
GACCACACCATCTTCTGCATCGCCGGTGACGGCTGCCTCCAGGAGGGCATCTCCGCCGAGGCGTCCTCCCTGGCGGGCCA
CCAGAAGCTCGGCAACCTCGTCCTGCTGTGGGACGACAACCACATCTCTATTGAGGGCGACACCGAGACCGCGGTCTCCG
AGGACACCCTCAAGCGCTACGAGGCCTACGGCTGGCACGTCCAGCGCGTCGCGCAGCTGCCCAACGGCGATCTGGACCCG
GCCGGCCTGGCCAGGGCCATCGAGGCCGCCAAGGCCGAGACCGAGCGCCCGTCGTTCATCGCGATGCGCTCGATCATCGC
CTGGCCCGCCCCGAACGCCCAGAACACCGAGGCCGCGCACGGCTCGGCGCTGGGTGACGAGGAGGTCGCGGCCACCAAGC
GCGTCCTGGGCTTCGACCCGGAGAAGTCCTTCGAGGTCTCCGACGAGGTGCTCGCGCACACCCGCGCCGCCCTCGACCGC
GGCCGCGACACCAAGAAGGAGTGGGAGAAGTCCTTCGCCGACTGGCGCGCCGCCAACACGGAGCGTGCCGCGGAGTTCGA
CCGGATCGCGGCGGGCGAGCTGCCCGCGGGCTGGGAGGACCACCTCCCGTCGTTCGAGACCGGCAAGGCCGTGGCCACCC
GCGCCGCGTCCGGCAAGGTGCTGCACGCGCTCGGTGCGGTCATCCCCGAGCTGTGGGGCGGCTCCGCCGACCTGGCGGGC
TCGAACAACACCACGATCGACAAGACCTCGTCGTTCCTGCCCGAGGGCAACCCGCTGCCGGGCGCCGACCCTTACGGCCG
CACGATCCACTTCGGCATCCGCGAGCACTCCATGGCCGCGGAGATGAACGGCATCGCGCTGCACGGCAACACCCGCATCT
ACGGCGGCACCTTCCTGGTGTTCTCCGACTACATGCGCAACGCCGTCCGGCTGTCCGCGCTGATGCACCTGCCGGTGACG
TACGTGTGGACGCACGACTCCATCGGTCTGGGCGAGGACGGCCCGACCCACCAGCCCATCGAGCACCTCGCCTCGCTGCG
CGCCATCCCTGGCCTCAACATCGTGCGCCCGGCCGACGCCAACGAGACCGCGATCGCCTGGCGCGAGATCCTGCGGCGCT
ACACGAAGGAGTACGGCGTGGGGGCCCCGCACGGCCTCGCGCTGACCCGTCAGGGCGTGCCGACGTACCCCGCCAACGAG
GCCACGGCCAAGGGTGGTTACGTCCTCTTCGACGCCGCCGGCCCCGAGGGGCAGGACGCCGAGCCGCAGGTCGTGCTGAT
CGGTACCGGTTCCGAGGTGCAGCTCGCCGTCGAGGCGCGGGAGCAGCTGCAGGCCGAGGGCATCCCCACCCGCGTGGTGT
CGATGCCGTCGGTCGAGTGGTTCGACCAGCAGGACCAGGCCTACCGCGACAGCGTGCTTCCCCCGTCCGTCCGGGCCCGG
GTCGCCGTCGAAGCCGGCATCGGCCTGACCTGGCACCGTTTCGTCGGTGACGCCGGGCGCATCGTCTCCCTGGAGCACTT
CGGTGCCTCGGCCGACGGCAAGGTCCTCTTCCGCGAGTTCGGCTTCACCGCCGACGCGGTGGCCAGCGCCGCCCGGGAAT
CGCTCGAAGCCGCCGCGCGCTGA

Domains

Predicted by InterProScan.

Transketolase, thiamine diphosphate binding domain (Transketolase_N)

(16-355)

Transketolase, C-terminal domain (Transketolase_C)

(580-687)

Transketolase, pyrimidine binding domain (Transket_pyr)

(370-534)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

43.777

97.571

0.427