Detailed information NTG0617442

Bioinformatically predicted

Overview

• Name: recX
• Type: Regulator
• Locus tag: LIT27_RS06310
• Genome accession: NZ_CP085392
• Coordinates: 1191708..1192511 (+)
• Length: 267 a.a.
• NCBI ID: WP_252246507.1
• Uniprot ID: -
• Organism: Cytobacillus oceanisediminis strain CK22
• Function: inhibit excessive RecA-mediated recombination (predicted from homology) Competence regulation

Genomic Context

Location: 1186708..1197511

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIT27_RS06280 (LIT27_06295)	-	1187134..1187802 (-)	669	WP_019383493.1	VWA domain-containing protein	-
LIT27_RS06285 (LIT27_06300)	-	1187876..1188937 (-)	1062	WP_009335824.1	M20/M25/M40 family metallo-hydrolase	-
LIT27_RS06290 (LIT27_06305)	-	1189246..1189749 (+)	504	WP_252246048.1	DoxX family protein	-
LIT27_RS06295 (LIT27_06310)	-	1190059..1190247 (-)	189	WP_009335826.1	YfhD family protein	-
LIT27_RS06300 (LIT27_06315)	-	1190340..1190465 (-)	126	WP_081757217.1	YfhE family protein	-
LIT27_RS06305 (LIT27_06320)	-	1190539..1191444 (-)	906	WP_009335827.1	TIGR01777 family oxidoreductase	-
LIT27_RS06310 (LIT27_06325)	recX	1191708..1192511 (+)	804	WP_252246507.1	recombination regulator RecX	Regulator
LIT27_RS06315 (LIT27_06330)	-	1192530..1193201 (-)	672	WP_252246049.1	SDR family oxidoreductase	-
LIT27_RS06320 (LIT27_06335)	-	1193429..1193758 (+)	330	WP_009335830.1	YfhH family protein	-
LIT27_RS06325 (LIT27_06340)	-	1193802..1193960 (-)	159	WP_009335831.1	YpzG family protein	-
LIT27_RS06330 (LIT27_06345)	-	1193981..1194151 (-)	171	WP_009335832.1	small, acid-soluble spore protein K	-
LIT27_RS06335 (LIT27_06350)	-	1194280..1194549 (+)	270	WP_009335833.1	YfhJ family protein	-
LIT27_RS06340 (LIT27_06355)	-	1194582..1195562 (-)	981	WP_009335834.1	metal-dependent hydrolase	-
LIT27_RS06345 (LIT27_06360)	mutY	1195795..1196895 (+)	1101	WP_251157533.1	A/G-specific adenine glycosylase	-
LIT27_RS06350 (LIT27_06365)	-	1196928..1197152 (-)	225	WP_019383506.1	hypothetical protein	-

Sequence

Protein

• Length: 267 a.a.
• Molecular weight: 31735.18 Da
• Isoelectric Point: 6.1897

>NTDB_id=617442 LIT27_RS06310 WP_252246507.1 1191708..1192511(+) (recX) [Cytobacillus oceanisediminis strain CK22]
MPIITKITFQKKNTDRYNIYMDYGKGEEYAFSVDEDVLIKHQLKKGMELDEFSLNEIGYQDDIRKSYNMAIQYLSRRMRS
ETEVRKHLADKEVEEPVIQEVVHKLYDYKFLNDEEYAKAFVRTQMNTSDKGKGLIRTELKEKGISPKVIDKALEVYSREA
ELSTAIRLCEKHAQKYGRDSSKILKQKLEQMLMRKGFNFDIIQEAISETEIEKEEDEELAALKYQAEKAKRKYANLPEFE
YRQKMKQTLFRKGFSFDLIDRYLSDEE

Nucleotide

• Length: 804 bp

>NTDB_id=617442 LIT27_RS06310 WP_252246507.1 1191708..1192511(+) (recX) [Cytobacillus oceanisediminis strain CK22]
ATGCCGATCATTACGAAAATCACATTTCAGAAAAAAAACACAGACCGCTACAATATATATATGGATTATGGGAAAGGTGA
AGAATATGCATTTAGTGTGGATGAAGATGTATTAATAAAACATCAGCTCAAAAAAGGAATGGAGCTTGATGAATTTTCAC
TAAATGAAATTGGCTATCAGGATGATATCCGGAAATCCTATAACATGGCTATTCAGTATTTATCCAGAAGGATGCGCTCA
GAAACCGAAGTCCGCAAACATTTAGCTGACAAAGAAGTTGAAGAACCGGTTATTCAGGAAGTTGTTCACAAATTGTATGA
TTACAAATTTTTGAACGATGAAGAATATGCAAAAGCTTTTGTGCGTACACAAATGAACACATCAGATAAAGGGAAAGGTT
TAATCCGCACTGAACTAAAGGAGAAAGGGATATCCCCTAAAGTAATCGATAAGGCGCTGGAGGTGTATTCAAGGGAAGCT
GAATTAAGTACAGCAATAAGGCTGTGTGAAAAGCATGCACAGAAATATGGCCGTGATTCATCAAAGATCCTCAAACAAAA
ACTGGAGCAGATGTTAATGCGTAAAGGTTTTAATTTTGACATCATTCAAGAAGCAATATCTGAAACGGAGATTGAAAAAG
AAGAAGATGAAGAATTGGCTGCCCTAAAGTATCAAGCGGAGAAAGCTAAGAGGAAATATGCTAATCTTCCTGAATTTGAA
TACAGGCAAAAAATGAAACAAACCTTATTTAGAAAGGGCTTTTCGTTTGATTTAATTGATCGATATTTAAGTGATGAAGA
ATAA

Domains

Predicted by InterproScan.

• RecX family (RecX_HTH2) (88-210)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recX	Bacillus subtilis subsp. subtilis str. 168	49.064	100	0.491