Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SAIN_RS01440 Genome accession   NC_022244
Coordinates   282904..283635 (+) Length   243 a.a.
NCBI ID   WP_003025975.1    Uniprot ID   -
Organism   Streptococcus anginosus C1051     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 277904..288635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAIN_RS01410 (SAIN_0278) - 278322..279761 (+) 1440 WP_021001281.1 NCS2 family permease -
  SAIN_RS01415 (SAIN_0279) tsaE 280005..280445 (+) 441 WP_003033807.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SAIN_RS01420 (SAIN_0280) - 280438..280959 (+) 522 WP_021001282.1 GNAT family N-acetyltransferase -
  SAIN_RS01425 (SAIN_0281) brpA 280966..282081 (+) 1116 WP_021001283.1 biofilm formation/cell division transcriptional regulator BrpA -
  SAIN_RS01430 (SAIN_0282) - 282128..282415 (-) 288 WP_021001284.1 hypothetical protein -
  SAIN_RS01435 (SAIN_0283) - 282425..282835 (-) 411 WP_003025977.1 HIT family protein -
  SAIN_RS01440 (SAIN_0284) pptA 282904..283635 (+) 732 WP_003025975.1 ABC transporter ATP-binding protein Regulator
  SAIN_RS01445 (SAIN_0285) pptB 283632..284678 (+) 1047 WP_021001285.1 ABC transporter permease Regulator
  SAIN_RS01450 (SAIN_0286) ccrZ 284729..285526 (+) 798 WP_003025972.1 cell cycle regulator CcrZ -
  SAIN_RS01455 (SAIN_0287) trmB 285523..286158 (+) 636 WP_021001286.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SAIN_RS01460 (SAIN_0288) - 286765..287463 (+) 699 WP_041783990.1 VIT family protein -
  SAIN_RS01465 (SAIN_0289) rimP 287711..288199 (+) 489 WP_003025965.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26832.36 Da        Isoelectric Point: 4.6585

>NTDB_id=61742 SAIN_RS01440 WP_003025975.1 282904..283635(+) (pptA) [Streptococcus anginosus C1051]
MLEIKGLTGGYVNIPVLKDISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDSPTAYREKIGFIP
ETPSLYEELTLREHIETVAMAYNVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKAKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELRAEFAMPEASLNDIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=61742 SAIN_RS01440 WP_003025975.1 282904..283635(+) (pptA) [Streptococcus anginosus C1051]
ATGTTAGAAATAAAAGGGCTTACAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGCTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAGGGTGAAATTTTAATTGACGGTGCCAAACTGCAAGATAGTCCTACGGCTTATCGTGAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTACGAAGAATTGACTTTAAGAGAACATATTGAAACGGTTGCTATGGCCTATAATGTGGAGCAAAA
GGTGGCTTTTGCACGCGTGGAAAAATTATTGACGATGTTTCGCTTGAAAGAAAAATTAGATTGGTTTCCGGTGCATTTTT
CTAAGGGGATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTAGGACTTGATCCAGTTGCCATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGCAAAAGGCAAGTCAATTCTTAT
GAGTACGCATGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTGCATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACGAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGCTTTGACAGAAGAG
GCGAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

72.803

98.354

0.716
  pptA Streptococcus salivarius strain HSISS4

72.385

98.354

0.712

Multiple sequence alignment