NTDB

Overview

Name	ceuB	Type	Machinery gene
Locus tag	MOP79_RS09635	Genome accession	NZ_CP102583
Coordinates	1889428..1890387 (-)	Length	319 a.a.
NCBI ID	WP_000777248.1	Uniprot ID	A0A0H2ZMI3
Organism	Streptococcus pneumoniae strain D39Mega17545
Function	DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1884428..1895387

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MOP79_RS09605	scpB	1884927..1885496 (+)	570	WP_000105310.1	SMC-Scp complex subunit ScpB	-
MOP79_RS09610	-	1885483..1886205 (+)	723	WP_001222228.1	pseudouridine synthase	-
MOP79_RS09615	yidD	1886205..1886447 (+)	243	WP_000821615.1	membrane protein insertion efficiency factor YidD	-
MOP79_RS09620	-	1886672..1887637 (-)	966	WP_000858246.1	siderophore ABC transporter substrate-binding protein	-
MOP79_RS09625	-	1887733..1888485 (-)	753	WP_000764310.1	ABC transporter ATP-binding protein	-
MOP79_RS09630	-	1888482..1889438 (-)	957	WP_001193676.1	iron chelate uptake ABC transporter family permease subunit	-
MOP79_RS09635	ceuB	1889428..1890387 (-)	960	WP_000777248.1	ABC transporter permease	Machinery gene
MOP79_RS10550	-	1890684..1890794 (-)	111	WP_001108391.1	hypothetical protein	-
MOP79_RS09640	galE	1890810..1891511 (-)	702	WP_000167846.1	UDP-glucose 4-epimerase GalE	-
MOP79_RS09645	pepA	1891912..1892976 (+)	1065	WP_000209199.1	glutamyl aminopeptidase	-
MOP79_RS09650	-	1892998..1893294 (+)	297	WP_000840136.1	bacteriocin immunity protein	-
MOP79_RS09655	-	1893976..1894419 (+)	444	WP_000651443.1	MarR family winged helix-turn-helix transcriptional regulator	-
MOP79_RS09660	-	1894423..1895187 (+)	765	WP_000082887.1	ester cyclase	-

Sequence

Protein

Download Length: 319 a.a. Molecular weight: 35418.29 Da Isoelectric Point: 9.7465

                                >NTDB_id=617350 MOP79_RS09635 WP_000777248.1 1889428..1890387(-) (ceuB) [Streptococcus pneumoniae strain D39Mega17545]

MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST

VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL

VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG

GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD

Nucleotide

Download Length: 960 bp

                                >NTDB_id=617350 MOP79_RS09635 WP_000777248.1 1889428..1890387(-) (ceuB) [Streptococcus pneumoniae strain D39Mega17545]

ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC

ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC

TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA

GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT

GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT

GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG

GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT

CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG

GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT

GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGCGCTATGGAGATAATCTAAGTCAAACCAAACTCAT

GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG

TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(10-312)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0H2ZMI3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	37.419	97.179	0.364

Detailed information NTG0617350