Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   MOP79_RS08485 Genome accession   NZ_CP102583
Coordinates   1671802..1672266 (-) Length   154 a.a.
NCBI ID   WP_001135782.1    Uniprot ID   P59659
Organism   Streptococcus pneumoniae strain D39Mega17545     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1666802..1677266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOP79_RS08465 - 1667753..1668721 (-) 969 WP_000105362.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  MOP79_RS08470 pdrM 1668875..1670236 (-) 1362 WP_000278532.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  MOP79_RS08475 - 1670247..1670507 (-) 261 WP_001105925.1 hypothetical protein -
  MOP79_RS08480 - 1670521..1671789 (-) 1269 WP_000924481.1 dihydroorotase -
  MOP79_RS08485 mutX 1671802..1672266 (-) 465 WP_001135782.1 8-oxo-dGTP diphosphatase Machinery gene
  MOP79_RS08490 - 1672276..1672929 (-) 654 WP_000401328.1 uracil-DNA glycosylase -
  MOP79_RS08495 - 1673065..1673712 (-) 648 WP_001824648.1 hypothetical protein -
  MOP79_RS08500 - 1673726..1674439 (-) 714 WP_000499433.1 YjjG family noncanonical pyrimidine nucleotidase -
  MOP79_RS08505 dhaM 1674897..1675277 (-) 381 Protein_1688 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  MOP79_RS10540 - 1675277..1675351 (-) 75 Protein_1689 dihydroxyacetone kinase subunit L -
  MOP79_RS08510 - 1675699..1676007 (-) 309 Protein_1690 histidine motif-containing protein -
  MOP79_RS08515 - 1676016..1676492 (+) 477 Protein_1691 transposase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17870.30 Da        Isoelectric Point: 4.2287

>NTDB_id=617328 MOP79_RS08485 WP_001135782.1 1671802..1672266(-) (mutX) [Streptococcus pneumoniae strain D39Mega17545]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAVREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGMLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=617328 MOP79_RS08485 WP_001135782.1 1671802..1672266(-) (mutX) [Streptococcus pneumoniae strain D39Mega17545]
ATGCCTCAGTTAGCGACGATTTGTTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGTACGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGATGCTAGAATGGGTTCC
CTATGATGAGGTTTTGAGCAAGCCGACCTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P59659

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

100

100

1