Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LI754_RS14245 Genome accession   NZ_CP085320
Coordinates   2828266..2828931 (-) Length   221 a.a.
NCBI ID   WP_044291247.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CJFA-182     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2823266..2833931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LI754_RS14225 - 2823735..2823848 (-) 114 WP_011447078.1 hypothetical protein -
  LI754_RS14230 - 2824509..2826508 (-) 2000 Protein_2756 ABC transporter permease -
  LI754_RS14235 - 2826505..2827260 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  LI754_RS14240 braS 2827368..2828255 (-) 888 WP_000143425.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  LI754_RS14245 braR 2828266..2828931 (-) 666 WP_044291247.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  LI754_RS14250 - 2828957..2829157 (-) 201 WP_000604727.1 hypothetical protein -
  LI754_RS14255 - 2829355..2830779 (+) 1425 WP_000953744.1 alkaline phosphatase -
  LI754_RS14900 - 2830839..2830940 (-) 102 WP_000731972.1 SE2200 family small protein -
  LI754_RS14265 - 2831062..2831517 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  LI754_RS14270 - 2831762..2832523 (-) 762 WP_000323448.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25391.44 Da        Isoelectric Point: 4.7819

>NTDB_id=617215 LI754_RS14245 WP_044291247.1 2828266..2828931(-) (braR) [Staphylococcus aureus strain CJFA-182]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDNFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQSIQLSLTELQILN
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=617215 LI754_RS14245 WP_044291247.1 2828266..2828931(-) (braR) [Staphylococcus aureus strain CJFA-182]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGCTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATAATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCAATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAT
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

98.19

100

0.982