Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   LI911_RS00450 Genome accession   NZ_CP085318
Coordinates   80408..81451 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain CKFA-361     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 75408..86451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LI911_RS00420 - 75715..75826 (+) 112 Protein_83 hypothetical protein -
  LI911_RS00425 - 75855..76268 (+) 414 WP_001566709.1 hypothetical protein -
  LI911_RS00430 - 76758..77744 (-) 987 WP_224851736.1 FUSC family protein -
  LI911_RS00435 map 78334..79092 (+) 759 WP_086353412.1 type I methionyl aminopeptidase -
  LI911_RS00440 - 79309..79695 (+) 387 WP_001110179.1 hypothetical protein -
  LI911_RS00445 liaF 79710..80411 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  LI911_RS00450 vraS 80408..81451 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  LI911_RS00455 vraR 81441..82070 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  LI911_RS00460 - 82182..83399 (-) 1218 WP_000037079.1 YihY/virulence factor BrkB family protein -
  LI911_RS00465 - 83677..83952 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  LI911_RS00470 - 83959..84423 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  LI911_RS00475 - 84570..84770 (+) 201 WP_000180460.1 DUF1128 family protein -
  LI911_RS00480 - 84773..86029 (+) 1257 WP_001789555.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=617130 LI911_RS00450 WP_001017131.1 80408..81451(+) (vraS) [Staphylococcus aureus strain CKFA-361]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=617130 LI911_RS00450 WP_001017131.1 80408..81451(+) (vraS) [Staphylococcus aureus strain CKFA-361]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1