Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   NUU05_RS05180 Genome accession   NZ_CP102538
Coordinates   990762..991244 (+) Length   160 a.a.
NCBI ID   WP_011681193.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain TH-4     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 985762..996244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NUU05_RS05160 (NUU05_05140) queG 986635..987753 (+) 1119 WP_002953100.1 tRNA epoxyqueuosine(34) reductase QueG -
  NUU05_RS05165 (NUU05_05145) prfB 987806..988904 (+) 1099 WP_096811488.1 peptide chain release factor 2 -
  NUU05_RS05170 (NUU05_05150) ftsE 988992..989684 (+) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  NUU05_RS05175 (NUU05_05155) ftsX 989677..990606 (+) 930 WP_011681194.1 permease-like cell division protein FtsX -
  NUU05_RS05180 (NUU05_05160) mutX 990762..991244 (+) 483 WP_011681193.1 8-oxo-dGTP diphosphatase Machinery gene
  NUU05_RS05185 (NUU05_05165) - 991255..992433 (+) 1179 WP_024704144.1 AI-2E family transporter -
  NUU05_RS05190 (NUU05_05170) - 992423..993652 (+) 1230 WP_011681192.1 lipopolysaccharide assembly protein LapB -
  NUU05_RS05195 (NUU05_05175) lepB 993775..994332 (+) 558 WP_011681191.1 signal peptidase I -
  NUU05_RS05200 (NUU05_05180) pepT 994540..995763 (+) 1224 WP_011681190.1 peptidase T -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18885.35 Da        Isoelectric Point: 4.7200

>NTDB_id=617129 NUU05_RS05180 WP_011681193.1 990762..991244(+) (mutX) [Streptococcus thermophilus strain TH-4]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLESGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=617129 NUU05_RS05180 WP_011681193.1 990762..991244(+) (mutX) [Streptococcus thermophilus strain TH-4]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAATCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706