Detailed information NTG0617038

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: NUU08_RS10700
• Genome accession: NZ_CP102522
• Coordinates: 2096672..2097748 (+)
• Length: 358 a.a.
• NCBI ID: WP_010906242.1
• Uniprot ID: Q9CE70
• Organism: Lactococcus lactis strain R-707-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2091672..2102748

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NUU08_RS10675 (NUU08_10665)	pgsA	2091832..2092404 (-)	573	WP_004254763.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
NUU08_RS10680 (NUU08_10670)	-	2092445..2093341 (-)	897	WP_004254758.1	RodZ family helix-turn-helix domain-containing protein	-
NUU08_RS10685 (NUU08_10675)	yfmH	2093553..2094836 (-)	1284	WP_004254752.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
NUU08_RS10690 (NUU08_10680)	yfmF	2094826..2096112 (-)	1287	WP_021214872.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
NUU08_RS10695 (NUU08_10685)	yaaA	2096310..2096672 (+)	363	WP_004254746.1	S4 domain-containing protein YaaA	-
NUU08_RS10700 (NUU08_10690)	recF	2096672..2097748 (+)	1077	WP_010906242.1	DNA replication/repair protein RecF	Machinery gene
NUU08_RS10705 (NUU08_10695)	-	2097835..2098203 (-)	369	WP_004254740.1	carboxymuconolactone decarboxylase family protein	-
NUU08_RS10710 (NUU08_10700)	-	2098281..2098658 (+)	378	WP_010906243.1	MerR family transcriptional regulator	-
NUU08_RS10715 (NUU08_10705)	-	2098671..2099615 (-)	945	WP_010906244.1	alpha/beta hydrolase	-
NUU08_RS10720 (NUU08_10710)	galE	2099738..2100718 (-)	981	WP_010906245.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41356.23 Da
• Isoelectric Point: 6.8652

>NTDB_id=617038 NUU08_RS10700 WP_010906242.1 2096672..2097748(+) (recF) [Lactococcus lactis strain R-707-1]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHAT
VPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLSRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=617038 NUU08_RS10700 WP_010906242.1 2096672..2097748(+) (recF) [Lactococcus lactis strain R-707-1]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCACCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTCACTCGTAGTCACAGAA
CAAGTCACGACAAAGAGCTCATTTCTTGGTCACAACAAGAAATGAAGGTCTCAGGAGTCGTTGAAAAAGCTCATGCAACT
GTTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTAGTCAAAGGTTCTCCAGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTACTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTATTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGAGCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGCCCTCATCGTGACGATTTACAATTTTTTATCAATGAGATTAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGTGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-353)

3D structure

• AlphaFold DB: Q9CE70

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	97.207	0.447