Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LJA36_RS03730 Genome accession   NZ_CP085282
Coordinates   880982..881638 (-) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens strain TPS17     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 875982..886638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LJA36_RS03710 spxH 876220..877122 (+) 903 WP_015417215.1 protease adaptor protein SpxH -
  LJA36_RS03715 - 877409..877576 (+) 168 WP_003155026.1 hypothetical protein -
  LJA36_RS03720 pepF 877614..879443 (-) 1830 WP_007409107.1 oligoendopeptidase F Regulator
  LJA36_RS03725 - 879671..880831 (-) 1161 WP_040238274.1 competence protein CoiA family protein -
  LJA36_RS03730 mecA 880982..881638 (-) 657 WP_003155032.1 adaptor protein MecA Regulator
  LJA36_RS03735 - 881914..882570 (+) 657 WP_007409109.1 TerC family protein -
  LJA36_RS03740 spx 882628..883023 (-) 396 WP_003155034.1 transcriptional regulator Spx -
  LJA36_RS03745 - 883201..883779 (-) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  LJA36_RS03750 - 883897..885084 (-) 1188 WP_040238278.1 putative glycoside hydrolase -
  LJA36_RS03755 oppF 885191..886108 (-) 918 WP_012117283.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=616869 LJA36_RS03730 WP_003155032.1 880982..881638(-) (mecA) [Bacillus amyloliquefaciens strain TPS17]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=616869 LJA36_RS03730 WP_003155032.1 880982..881638(-) (mecA) [Bacillus amyloliquefaciens strain TPS17]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895