Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SANR_RS08600 Genome accession   NC_022239
Coordinates   1753569..1755329 (-) Length   586 a.a.
NCBI ID   WP_003035495.1    Uniprot ID   I0SFH9
Organism   Streptococcus anginosus C238     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1748569..1760329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS08575 (SANR_1664) - 1749013..1749738 (-) 726 WP_003035547.1 GntR family transcriptional regulator -
  SANR_RS08580 (SANR_1665) celB 1749772..1751040 (-) 1269 WP_020999792.1 PTS cellobiose transporter subunit IIC -
  SANR_RS08585 (SANR_1666) - 1751183..1752580 (+) 1398 WP_020999793.1 glycoside hydrolase family 1 protein -
  SANR_RS08590 (SANR_1667) - 1752714..1753034 (-) 321 WP_003035457.1 PTS cellobiose transporter subunit IIA -
  SANR_RS08595 (SANR_1668) - 1753045..1753359 (-) 315 WP_020999794.1 PTS cellobiose transporter subunit IIB -
  SANR_RS08600 (SANR_1669) rcrQ 1753569..1755329 (-) 1761 WP_003035495.1 ABC transporter ATP-binding protein Regulator
  SANR_RS08605 (SANR_1670) - 1755319..1757081 (-) 1763 Protein_1690 ABC transporter ATP-binding protein -
  SANR_RS08610 (SANR_1671) - 1757074..1757532 (-) 459 WP_003035559.1 MarR family winged helix-turn-helix transcriptional regulator -
  SANR_RS08615 (SANR_1672) - 1757688..1758098 (-) 411 WP_003035443.1 peptide deformylase -
  SANR_RS08620 (SANR_1673) scrK 1758166..1759065 (-) 900 WP_020999796.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 65141.30 Da        Isoelectric Point: 6.0278

>NTDB_id=61682 SANR_RS08600 WP_003035495.1 1753569..1755329(-) (rcrQ) [Streptococcus anginosus C238]
MENKKSSLFSQVEPYIKGFQFPLLVAFVGVILSSVITVYGPVKLKEITNLITEGMRSRIDLKAISNIALFLAVLYVVGAV
LNYMQSFIISSVVQHFSKRLRTAIAEKINKLPLRYFDSHSQGDTLSRVTNDVDTVGQSLNQSLGTVISSSLLLIAVLFMM
FYNNVVLSFVTIGSVLIGFVFVALIMGKSQRFFRTQQENLASVNGYVEEMYSGHNVIVSYNAAEESKATFQTLNTNLYNS
MWKSQFISGIMMPLMMFVGNFGYVMVVLVGASMALNGDVTMGTIVAFMVYVRIFSQPLSQIAQGITTLQQASAAMGRVFE
FLAEPEMENDEHKAQQLTTLKGDVTFDKVFFGYNPDRTIIHDFSANAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGR
ITIDGVDTKQMKRSEVHDAFSMVLQDTWLFEGTIKENLIYNQKNISDEAVVAAAKAVGVHHFIKTLPKGYDMVLDDTVSL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRNGNIIEQGN
HDQLMEENGFYADLYNSQFDEDAEYA

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=61682 SANR_RS08600 WP_003035495.1 1753569..1755329(-) (rcrQ) [Streptococcus anginosus C238]
ATGGAAAATAAAAAATCATCTTTATTTAGCCAAGTGGAACCCTATATCAAAGGATTCCAGTTTCCCTTGCTCGTTGCATT
TGTGGGAGTAATACTATCTAGTGTTATCACGGTTTATGGTCCGGTCAAATTAAAAGAAATTACCAATCTCATCACAGAAG
GAATGAGAAGTCGGATTGATCTGAAGGCTATCTCTAATATTGCTCTTTTCTTAGCAGTTTTATATGTGGTGGGTGCTGTA
TTAAATTATATGCAATCCTTTATTATTTCGTCCGTCGTTCAGCATTTTTCAAAACGTTTACGGACAGCCATTGCGGAGAA
AATTAATAAATTACCCTTGCGGTATTTTGATAGTCATTCGCAAGGGGACACTCTTTCACGAGTCACTAATGACGTGGATA
CTGTTGGACAATCGCTGAACCAAAGTTTAGGAACAGTGATTTCATCAAGTTTGCTTCTCATTGCTGTTCTCTTTATGATG
TTTTATAACAACGTGGTTCTATCCTTTGTAACGATTGGATCGGTTTTGATTGGTTTTGTCTTTGTTGCGTTGATTATGGG
CAAATCACAACGGTTTTTCCGCACACAACAAGAGAATCTTGCTAGTGTCAATGGATATGTGGAAGAGATGTATTCTGGTC
ACAATGTCATTGTCAGCTACAATGCTGCAGAGGAATCTAAAGCAACCTTTCAAACGCTCAATACCAATCTTTACAACAGC
ATGTGGAAATCACAATTCATTTCAGGGATTATGATGCCGCTTATGATGTTTGTAGGGAACTTCGGTTACGTTATGGTTGT
TTTGGTTGGGGCGAGCATGGCCTTGAATGGCGATGTCACTATGGGAACGATTGTTGCCTTTATGGTATATGTACGGATTT
TCTCTCAACCGTTGTCACAAATTGCACAAGGGATTACTACTCTTCAACAAGCTAGCGCTGCTATGGGACGCGTATTTGAA
TTTTTAGCAGAGCCTGAAATGGAAAATGATGAGCACAAAGCGCAACAACTCACGACCCTAAAAGGAGATGTTACCTTTGA
TAAGGTATTCTTTGGTTATAATCCAGATCGAACGATTATTCATGATTTCTCTGCCAATGCAAAAGCAGGGCAAAAAATTG
CCATTGTCGGTCCGACCGGTGCTGGGAAGACGACCATTGTCAACTTGCTCATGAAATTTTATGAGATTGATAAGGGGCGC
ATTACAATTGACGGTGTTGATACGAAGCAAATGAAACGTTCTGAGGTACACGATGCCTTCTCCATGGTTCTCCAAGACAC
TTGGTTATTTGAGGGAACGATTAAAGAAAATTTGATTTACAATCAGAAAAATATTTCTGACGAAGCAGTTGTGGCAGCTG
CCAAAGCTGTTGGGGTTCATCACTTCATCAAGACTCTACCAAAAGGATACGATATGGTGCTGGACGATACAGTAAGTCTT
TCTGTGGGGCAAAAGCAATTGCTGACCATTGCGCGTGCCCTTCTTAAAGATGCTCCGTTGCTTATCTTGGACGAAGCGAC
TTCATCTGTTGATACGCGGACAGAAGAATTGATTCAAAAAGCGATGGATAAACTAATGGAAGGACGAACTTCCTTTGTCA
TTGCTCACCGTTTGTCAACAATTCGTAATGCTGATTTGATTTTGGTCATGCGTAATGGTAATATCATTGAACAAGGAAAT
CACGATCAATTGATGGAAGAAAATGGCTTCTATGCTGATCTTTACAATAGTCAATTCGATGAAGACGCAGAGTATGCGTA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SFH9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

71.478

99.317

0.71

Multiple sequence alignment