Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   JIX56_RS11290 Genome accession   NZ_CP102512
Coordinates   2615150..2615926 (+) Length   258 a.a.
NCBI ID   WP_020114122.1    Uniprot ID   A0A5P8KDE7
Organism   Streptomyces sp. CA-210063     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2610150..2620926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JIX56_RS11275 (JIX56_11275) - 2610359..2610892 (+) 534 WP_257539788.1 TerD family protein -
  JIX56_RS11280 (JIX56_11280) - 2610995..2613892 (-) 2898 WP_257539790.1 vitamin B12-dependent ribonucleotide reductase -
  JIX56_RS11285 (JIX56_11285) nrdR 2614053..2614613 (-) 561 WP_257539792.1 transcriptional regulator NrdR -
  JIX56_RS11290 (JIX56_11290) dinR/lexA 2615150..2615926 (+) 777 WP_020114122.1 transcriptional repressor LexA Regulator
  JIX56_RS11295 (JIX56_11295) - 2616090..2618081 (-) 1992 WP_257539794.1 ATP-dependent DNA helicase -
  JIX56_RS11300 (JIX56_11300) - 2618332..2619069 (-) 738 WP_257539796.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 27936.61 Da        Isoelectric Point: 7.0666

>NTDB_id=616804 JIX56_RS11290 WP_020114122.1 2615150..2615926(+) (dinR/lexA) [Streptomyces sp. CA-210063]
MTTTADSATITAQDRSQSRLEPVHAMNEATNHEGPKRALPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSSAQPTDTAGKPAASYVPLVGRIAAGGPILAEESVEDV
FPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEPI
PGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 777 bp        

>NTDB_id=616804 JIX56_RS11290 WP_020114122.1 2615150..2615926(+) (dinR/lexA) [Streptomyces sp. CA-210063]
GTGACCACCACCGCTGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGAGCCGACTCGAGCCGGTGCATGCAATGAA
CGAAGCCACGAACCATGAAGGGCCCAAGCGAGCCCTGCCCGGCCGACCTCCAGGTATCAGGGCGGACAGCTCCGGGCTCA
CCGACCGGCAGCGCCGGGTCATCGAGGTGATCAGGGACTCGGTGCAGCGGCGTGGATACCCGCCGTCGATGCGGGAGATC
GGCCAGGCGGTCGGCCTGTCCAGCACATCCTCCGTGGCACACCAGCTGATGGCCCTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGCCCGCGTGCGTACGAGGTCCGCGGCTCCGACCAGTCCTCGGCGCAGCCCACGGACACCGCGGGCAAGC
CGGCCGCGTCGTACGTGCCGCTCGTCGGCCGGATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAATCGGTCGAGGACGTG
TTCCCGCTCCCCCGCCAGCTGGTGGGCGACGGCGAGCTGTTCGTCCTGAAGGTCGTGGGTGACTCGATGATCGAGGCCGC
GATCTGCGACGGCGACTGGGTGACGGTCCGCCGTCAGCCCGTCGCCGAGAACGGCGACATCGTGGCCGCCATGCTGGACG
GCGAAGCCACGGTCAAGCGCTTCAAGCGAGAGGACGGCCACGTCTGGCTGCTGCCGCACAACGCCGCCTACGAGCCCATC
CCGGGTGACGACGCGACCATTCTCGGCAAGGTGGTGGCAGTCCTGCGCCGCGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(140-252)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P8KDE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.19

81.395

0.376