Detailed information NTG0616757

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JIW86_RS25700
• Genome accession: NZ_CP102509
• Coordinates: 5522680..5523708 (+)
• Length: 342 a.a.
• NCBI ID: WP_257556230.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00162
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5517680..5528708

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JIW86_RS25680 (JIW86_25680)	-	5518067..5519416 (-)	1350	WP_257556228.1	GH1 family beta-glucosidase	-
JIW86_RS25685 (JIW86_25685)	-	5519413..5520237 (-)	825	WP_215147426.1	carbohydrate ABC transporter permease	-
JIW86_RS25690 (JIW86_25690)	-	5520234..5521220 (-)	987	WP_215147424.1	carbohydrate ABC transporter permease	-
JIW86_RS25695 (JIW86_25695)	-	5521228..5522577 (-)	1350	WP_257556229.1	ABC transporter substrate-binding protein	-
JIW86_RS25700 (JIW86_25700)	cytR	5522680..5523708 (+)	1029	WP_257556230.1	LacI family DNA-binding transcriptional regulator	Regulator
JIW86_RS25710 (JIW86_25710)	orn	5523939..5524541 (-)	603	WP_215147418.1	oligoribonuclease	-
JIW86_RS25715 (JIW86_25715)	-	5524648..5525820 (-)	1173	WP_215147416.1	helix-turn-helix domain-containing protein	-
JIW86_RS25720 (JIW86_25720)	-	5526197..5526643 (-)	447	WP_322975553.1	hypothetical protein	-
JIW86_RS25725 (JIW86_25725)	-	5526967..5527500 (+)	534	WP_215147414.1	universal stress protein	-
JIW86_RS25730 (JIW86_25730)	-	5527599..5528168 (+)	570	WP_215147412.1	acetate uptake transporter	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 36086.96 Da
• Isoelectric Point: 6.8547

>NTDB_id=616757 JIW86_RS25700 WP_257556230.1 5522680..5523708(+) (cytR) [Streptomyces sp. NBC_00162]
MKEQGRKGGRPTLEEVAVRAGVGRGTVSRVINGSSKVSDHTRTAVEAAVAELGYVPNRAARALAANRTDAIALVIPEPEA
RFFAEPYFSDVVRGVGSALAETDVQLVLTLAGSDRERRRLSQYLSGHRVDGVLLVSVHAGDPLPELLAELGIPTVISGRR
SAAETLPSVDSDNLGGAAEAVRHLVGRGRRAIATITGPLDVYGAQCRLDGYRQALAAAGHLADEGLISVGDFTEEGGRRA
MRELLERRPALDAVFAASDVMAAGARRELRAAGHRIPQDVALVGFDDSVVARHMDPPLTSVRQPIEEMGRTMARVLLAGI
AGEPGGDAAVVLPNRLVVRESS

Nucleotide

• Length: 1029 bp

>NTDB_id=616757 JIW86_RS25700 WP_257556230.1 5522680..5523708(+) (cytR) [Streptomyces sp. NBC_00162]
ATGAAGGAGCAAGGGCGCAAAGGGGGACGGCCGACCCTGGAGGAGGTCGCGGTGCGCGCCGGAGTCGGGCGCGGCACGGT
CTCCCGGGTGATCAACGGTTCCTCCAAGGTCAGCGACCACACCAGGACCGCCGTGGAGGCGGCCGTCGCCGAGCTGGGCT
ACGTGCCCAACCGCGCGGCCCGCGCCCTCGCGGCCAACCGTACCGACGCCATCGCTCTCGTGATTCCCGAGCCGGAGGCC
CGCTTCTTCGCCGAGCCTTACTTCTCCGACGTGGTCCGCGGGGTCGGCTCCGCCCTCGCCGAGACCGACGTCCAGCTCGT
CCTCACCCTGGCCGGCAGCGACCGCGAGCGCCGCCGCCTCTCCCAGTACCTGTCGGGGCACCGCGTCGACGGGGTGCTCC
TCGTCTCCGTCCACGCCGGGGATCCGCTGCCGGAGCTGCTGGCCGAGCTCGGCATCCCGACGGTGATCAGCGGCCGCCGC
TCCGCCGCCGAGACGCTGCCCTCGGTGGATTCGGACAACCTGGGGGGCGCGGCCGAGGCCGTACGCCACCTCGTCGGCCG
GGGCCGCCGCGCGATCGCCACGATCACCGGACCGCTGGACGTGTACGGGGCCCAGTGCCGACTCGACGGCTACCGGCAGG
CCCTGGCCGCCGCCGGGCACCTGGCCGACGAGGGGCTGATCTCGGTCGGCGACTTCACCGAGGAGGGCGGCCGCCGGGCC
ATGCGCGAGCTGCTGGAGCGCCGCCCGGCGCTCGACGCGGTCTTCGCGGCCTCGGACGTCATGGCGGCGGGCGCCCGGCG
GGAGCTGCGCGCGGCCGGCCACCGGATTCCGCAGGACGTGGCGCTGGTCGGCTTCGACGACTCGGTGGTGGCCCGGCACA
TGGACCCGCCGCTGACCAGCGTCCGGCAGCCGATCGAGGAGATGGGCCGGACCATGGCGCGGGTGCTGCTGGCCGGGATC
GCCGGGGAACCGGGGGGAGACGCGGCCGTCGTGCTGCCGAACCGGCTGGTGGTCCGGGAGTCCTCGTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-342)

• Bacterial regulatory proteins, lacI family (LacI) (12-57)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	38.166	98.83	0.377
cytR	Vibrio parahaemolyticus RIMD 2210633	37.574	98.83	0.371