Detailed information NTG0616658

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NUI00_RS17010
• Genome accession: NZ_CP102488
• Coordinates: 3500888..3501913 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O15:H18 strain ST69
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3495888..3506913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NUI00_RS16990 (NUI00_16995)	metJ	3497073..3497390 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NUI00_RS16995 (NUI00_17000)	yiiX	3497450..3498058 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
NUI00_RS17000 (NUI00_17005)	rpmE	3498119..3498331 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NUI00_RS17005 (NUI00_17010)	priA	3498534..3500732 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
NUI00_RS17010 (NUI00_17015)	cytR	3500888..3501913 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NUI00_RS17015 (NUI00_17020)	ftsN	3502005..3502964 (+)	960	WP_000068844.1	cell division protein FtsN	-
NUI00_RS17020 (NUI00_17025)	hslV	3503057..3503587 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NUI00_RS17025 (NUI00_17030)	hslU	3503597..3504928 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
NUI00_RS17030 (NUI00_17035)	menA	3504995..3505921 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NUI00_RS17035 (NUI00_17040)	rraA	3506014..3506499 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=616658 NUI00_RS17010 WP_000644904.1 3500888..3501913(+) (cytR) [Escherichia coli O15:H18 strain ST69]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=616658 NUI00_RS17010 WP_000644904.1 3500888..3501913(+) (cytR) [Escherichia coli O15:H18 strain ST69]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628