Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LG298_RS05745 Genome accession   NZ_CP085255
Coordinates   1083425..1084228 (+) Length   267 a.a.
NCBI ID   WP_159344664.1    Uniprot ID   A0A800NBG3
Organism   Cytobacillus firmus strain ABH-509     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1078425..1089228
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG298_RS05715 (LG298_05630) - 1079244..1079912 (-) 669 WP_197214458.1 VWA domain-containing protein -
  LG298_RS05720 (LG298_05635) - 1079987..1081048 (-) 1062 WP_197214459.1 M20 family metallopeptidase -
  LG298_RS05725 (LG298_05640) - 1081374..1081877 (+) 504 WP_404324413.1 DoxX family protein -
  LG298_RS05730 (LG298_05645) - 1081933..1082121 (-) 189 WP_048011767.1 YfhD family protein -
  LG298_RS05735 (LG298_05650) - 1082215..1082340 (-) 126 WP_226619347.1 YfhE family protein -
  LG298_RS05740 (LG298_05655) - 1082415..1083320 (-) 906 WP_197214460.1 TIGR01777 family oxidoreductase -
  LG298_RS05745 (LG298_05660) recX 1083425..1084228 (+) 804 WP_159344664.1 recombination regulator RecX Regulator
  LG298_RS05750 (LG298_05665) - 1084248..1084919 (-) 672 WP_404323583.1 SDR family NAD(P)-dependent oxidoreductase -
  LG298_RS05755 (LG298_05670) - 1085097..1085426 (+) 330 WP_404323584.1 YfhH family protein -
  LG298_RS05760 (LG298_05675) - 1085484..1085642 (-) 159 WP_009335831.1 YpzG family protein -
  LG298_RS05765 (LG298_05680) - 1085662..1085832 (-) 171 WP_048011772.1 small, acid-soluble spore protein K -
  LG298_RS05770 (LG298_05685) - 1085960..1086229 (+) 270 WP_048011773.1 YfhJ family protein -
  LG298_RS05775 (LG298_05690) - 1086263..1087243 (-) 981 WP_048011774.1 metal-dependent hydrolase -
  LG298_RS05780 (LG298_05695) mutY 1087449..1088543 (+) 1095 WP_404323587.1 A/G-specific adenine glycosylase -
  LG298_RS05785 (LG298_05700) - 1088583..1088807 (-) 225 WP_048011776.1 hypothetical protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 31623.07 Da        Isoelectric Point: 5.2339

>NTDB_id=616562 LG298_RS05745 WP_159344664.1 1083425..1084228(+) (recX) [Cytobacillus firmus strain ABH-509]
MPTITKITVQKKNTDRYNIYMDYGKGEEYAFSVDEDVLIKHQLKKGMELDEFSLNEIGYQDDIRKAYNRAIHYLSRRMRS
ETEVRKHLAEKEVEEPVIQEVIHKLYDYHFLNDEEFAAAFVRTQMNTSDKGKGLIRTELKEKGISPQLIEMALEEYPRDA
ELAAAIRLCEKYSKKYARDSSKILKQKLEQMLMRKGFNFDIIQEAVTETEIDKEEDEELAALRFQAEKAKKKYANLPEFE
YMQKMKQALFRKGFSFDLIEQFLSEEE

Nucleotide


Download         Length: 804 bp        

>NTDB_id=616562 LG298_RS05745 WP_159344664.1 1083425..1084228(+) (recX) [Cytobacillus firmus strain ABH-509]
ATGCCGACTATTACTAAAATCACAGTTCAGAAAAAAAACACAGACCGCTACAATATATATATGGATTATGGGAAAGGTGA
AGAATATGCATTTAGTGTGGATGAAGATGTTTTAATTAAGCATCAGCTAAAAAAGGGAATGGAGCTTGATGAATTCTCTT
TAAATGAAATTGGCTATCAGGATGATATCCGGAAAGCCTATAACAGGGCTATTCATTATTTATCCAGAAGAATGCGCTCA
GAAACCGAAGTCCGCAAACATTTAGCTGAAAAAGAAGTGGAAGAACCGGTTATTCAGGAAGTTATCCACAAATTGTATGA
TTACCATTTTTTAAATGATGAAGAATTTGCAGCAGCTTTTGTGCGTACACAAATGAATACATCAGATAAAGGTAAAGGCC
TGATCCGCACAGAACTAAAGGAAAAAGGGATTTCCCCTCAATTAATCGAAATGGCATTGGAGGAATATCCAAGGGATGCT
GAGTTAGCTGCCGCTATAAGGCTGTGTGAAAAATATTCAAAGAAATATGCTCGTGATTCATCCAAAATCCTTAAGCAAAA
GCTGGAACAGATGTTAATGCGCAAAGGCTTTAATTTCGACATCATTCAAGAAGCTGTAACTGAAACGGAGATTGATAAAG
AAGAGGATGAAGAACTGGCTGCCCTGAGGTTCCAGGCGGAAAAAGCGAAGAAGAAATATGCAAACCTTCCTGAGTTCGAA
TATATGCAAAAAATGAAGCAAGCCTTGTTCAGAAAAGGTTTTTCTTTTGATTTGATAGAGCAATTTTTAAGTGAAGAAGA
ATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(88-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A800NBG3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

50.562

100

0.506