Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LG330_RS07385 Genome accession   NZ_CP085252
Coordinates   1343965..1344147 (+) Length   60 a.a.
NCBI ID   WP_404408686.1    Uniprot ID   -
Organism   Jeotgalibacillus malaysiensis strain ABH-525     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1338965..1349147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG330_RS07365 (LG330_07315) - 1339300..1339608 (+) 309 WP_039808436.1 metal-sulfur cluster assembly factor -
  LG330_RS07370 (LG330_07320) - 1340054..1340884 (-) 831 WP_404408680.1 undecaprenyl-diphosphate phosphatase -
  LG330_RS07375 (LG330_07325) clpB 1341026..1343602 (+) 2577 WP_404408682.1 ATP-dependent chaperone ClpB -
  LG330_RS07380 (LG330_07330) - 1343639..1343824 (-) 186 WP_404408684.1 YjzD family protein -
  LG330_RS07385 (LG330_07335) comZ 1343965..1344147 (+) 183 WP_404408686.1 ComZ family protein Regulator
  LG330_RS07390 (LG330_07340) - 1344416..1345369 (+) 954 WP_404408688.1 beta-ketoacyl-ACP synthase III -
  LG330_RS07395 (LG330_07345) fabF 1345391..1346626 (+) 1236 WP_404408690.1 beta-ketoacyl-ACP synthase II -
  LG330_RS07400 (LG330_07350) - 1346967..1347995 (+) 1029 WP_404408692.1 ABC transporter ATP-binding protein -
  LG330_RS07405 (LG330_07355) - 1347992..1349005 (+) 1014 WP_404408694.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6651.73 Da        Isoelectric Point: 4.2850

>NTDB_id=616454 LG330_RS07385 WP_404408686.1 1343965..1344147(+) (comZ) [Jeotgalibacillus malaysiensis strain ABH-525]
MADDKTMEFMQIAMKYLPEAKAKMDEAGIEVSVESLQPFMTIFAKAMNDAYELGKADAGK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=616454 LG330_RS07385 WP_404408686.1 1343965..1344147(+) (comZ) [Jeotgalibacillus malaysiensis strain ABH-525]
ATGGCAGACGATAAAACAATGGAATTTATGCAGATTGCAATGAAATACTTACCGGAAGCAAAAGCAAAAATGGACGAAGC
AGGCATCGAAGTTTCAGTAGAATCACTCCAGCCATTCATGACAATCTTCGCAAAAGCAATGAACGACGCATACGAACTTG
GGAAAGCAGATGCCGGGAAGTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

58.621

96.667

0.567