Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   LG336_RS03720 Genome accession   NZ_CP085225
Coordinates   763513..764463 (+) Length   316 a.a.
NCBI ID   WP_404331213.1    Uniprot ID   -
Organism   Mesobacillus maritimus strain ADH-29     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 758513..769463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG336_RS03700 (LG336_03705) clpB 758667..761270 (+) 2604 WP_404331209.1 ATP-dependent chaperone ClpB -
  LG336_RS03705 (LG336_03710) - 761315..761506 (-) 192 WP_404331210.1 YjzD family protein -
  LG336_RS03710 (LG336_03715) - 761687..762424 (+) 738 WP_404331211.1 hydrolase -
  LG336_RS03715 (LG336_03720) - 762490..763383 (+) 894 WP_404331212.1 hypothetical protein -
  LG336_RS03720 (LG336_03725) med 763513..764463 (+) 951 WP_404331213.1 BMP family ABC transporter substrate-binding protein Regulator
  LG336_RS03725 (LG336_03730) - 764528..764821 (-) 294 WP_404331214.1 hypothetical protein -
  LG336_RS03730 (LG336_03735) - 765013..765945 (+) 933 WP_404331215.1 beta-ketoacyl-ACP synthase III -
  LG336_RS03735 (LG336_03740) fabF 765972..767213 (+) 1242 WP_404331216.1 beta-ketoacyl-ACP synthase II -
  LG336_RS03740 (LG336_03745) - 767357..768139 (+) 783 WP_404331217.1 DUF2268 domain-containing protein -
  LG336_RS03745 (LG336_03750) - 768312..769058 (+) 747 WP_404331218.1 YjbA family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35540.81 Da        Isoelectric Point: 4.2621

>NTDB_id=616040 LG336_RS03720 WP_404331213.1 763513..764463(+) (med) [Mesobacillus maritimus strain ADH-29]
MLKRFGLILFSLLLLVGCGQPLTTGKIEKVGLLVPETINDQVWGTEGYRGLLRIQSRFNIDVYYKEGMNSEPLVEAAIKE
FEGNGVNLIYGHGNEYAEYFNQISEKYPDIHFISFNGDAKNENTTSLNFDAYAMGFFGGMVAAHMTQSNHLGVIAAFEWQ
PEVEGFYEGATFYNNEIDVEIYYVGHWDNDEKAIQILDRLLSRGADVIYPAGDGYNIPIIERVKEQGLFVIGYVSDQSDL
GESTVLTSTVQHVDVLYELVASKYNEETLESGNLYFDIPDGVISLGKFSPNVDNEFREVMHQHINTYKSTGKLPND

Nucleotide


Download         Length: 951 bp        

>NTDB_id=616040 LG336_RS03720 WP_404331213.1 763513..764463(+) (med) [Mesobacillus maritimus strain ADH-29]
ATGTTGAAACGTTTTGGGCTTATTTTGTTTAGCCTCCTATTGTTGGTAGGTTGCGGACAACCTCTTACAACAGGGAAAAT
TGAAAAAGTTGGCCTACTCGTTCCTGAAACAATTAATGACCAAGTCTGGGGGACAGAGGGTTACCGAGGATTGTTGAGAA
TTCAATCCCGTTTTAATATCGACGTCTATTATAAAGAAGGGATGAACTCCGAGCCGTTAGTTGAAGCCGCTATAAAGGAA
TTTGAGGGAAATGGTGTTAATCTCATATATGGCCATGGGAATGAGTATGCTGAATATTTTAATCAGATTTCAGAGAAATA
TCCAGATATTCATTTTATTAGTTTTAATGGCGATGCAAAAAATGAAAATACCACAAGTCTAAATTTCGATGCGTATGCGA
TGGGGTTCTTTGGCGGAATGGTTGCAGCACATATGACGCAATCAAATCACCTCGGCGTCATTGCGGCTTTTGAATGGCAA
CCAGAAGTCGAAGGTTTTTATGAAGGAGCAACATTCTATAACAATGAAATTGATGTGGAAATTTATTATGTTGGCCACTG
GGATAATGATGAAAAGGCCATACAAATTCTCGATAGATTACTTTCAAGGGGCGCTGACGTGATTTATCCAGCCGGTGATG
GCTATAATATTCCAATTATTGAACGAGTAAAAGAACAAGGCTTGTTTGTAATTGGTTATGTTTCAGATCAATCAGATTTG
GGGGAGTCCACAGTGCTAACCAGTACGGTTCAGCATGTAGATGTCCTTTATGAGCTAGTTGCTTCTAAATATAATGAAGA
GACATTGGAATCAGGAAATTTATATTTCGATATTCCTGATGGGGTGATTTCCCTTGGGAAATTCAGTCCTAATGTTGATA
ATGAATTCAGGGAAGTCATGCATCAGCATATTAACACGTATAAATCGACTGGAAAACTGCCAAATGATTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

55.063

100

0.551