Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SCI_RS01735 Genome accession   NC_022238
Coordinates   329492..330223 (+) Length   243 a.a.
NCBI ID   WP_003033712.1    Uniprot ID   F9P436
Organism   Streptococcus constellatus subsp. pharyngis C1050     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 324492..335223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCI_RS01705 (SCI_0336) - 324830..326269 (+) 1440 WP_006267078.1 NCS2 family permease -
  SCI_RS01710 (SCI_0337) tsaE 326607..327047 (+) 441 WP_003070375.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SCI_RS01715 (SCI_0338) - 327040..327561 (+) 522 WP_003070373.1 GNAT family N-acetyltransferase -
  SCI_RS01720 (SCI_0339) brpA 327569..328675 (+) 1107 WP_003070371.1 biofilm formation/cell division transcriptional regulator BrpA -
  SCI_RS01725 (SCI_0340) - 328716..329003 (-) 288 WP_006267192.1 hypothetical protein -
  SCI_RS01730 (SCI_0341) - 329013..329423 (-) 411 WP_006267256.1 HIT family protein -
  SCI_RS01735 (SCI_0342) pptA 329492..330223 (+) 732 WP_003033712.1 ABC transporter ATP-binding protein Regulator
  SCI_RS01740 (SCI_0343) pptB 330220..331266 (+) 1047 WP_020997603.1 ABC transporter permease Regulator
  SCI_RS01745 (SCI_0344) ccrZ 331317..332114 (+) 798 WP_006267497.1 cell cycle regulator CcrZ -
  SCI_RS01750 (SCI_0345) trmB 332111..332746 (+) 636 WP_006267578.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SCI_RS01755 (SCI_0346) - 333151..333843 (+) 693 WP_006267630.1 VIT family protein -
  SCI_RS01760 (SCI_0347) rimP 334055..334543 (+) 489 WP_006267077.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26860.46 Da        Isoelectric Point: 4.7336

>NTDB_id=61576 SCI_RS01735 WP_003033712.1 329492..330223(+) (pptA) [Streptococcus constellatus subsp. pharyngis C1050]
MLEIKGLTGGYVNIPVLKDISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDSPTAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKAKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELRAEFAMPEASLNDIYLVLTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=61576 SCI_RS01735 WP_003033712.1 329492..330223(+) (pptA) [Streptococcus constellatus subsp. pharyngis C1050]
ATGTTAGAAATAAAAGGGCTTACAGGGGGCTATGTAAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGCTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAAGGTGAAATTTTAATTGACGGTGCCAAACTGCAAGATAGTCCTACGGCTTATCGTAAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTATGAGGAATTAACGCTGCGCGAGCATATTGAAACGGTTGCTATGGCTTATGATGTGGAGCAAAA
GGTGGCTTTTGCACGCGTGGAAAAATTATTGACGATGTTTCGCTTGAAAGAAAAATTAGATTGGTTTCCGGTGCATTTTT
CTAAGGGGATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTAGGACTTGATCCAGTTGCCATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGCAAAAGGCAAGTCAATTCTTAT
GAGTACGCATGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTGCATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACGAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGTTTTGACAGAAGAG
GCGAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P436

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

72.803

98.354

0.716
  pptA Streptococcus salivarius strain HSISS4

72.385

98.354

0.712

Multiple sequence alignment