Detailed information NTG0615685

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NQZ88_RS06540
• Genome accession: NZ_CP102152
• Coordinates: 1283618..1284892 (-)
• Length: 424 a.a.
• NCBI ID: WP_257116183.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DNS11
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1278618..1289892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ88_RS06510 (NQZ88_06510)	-	1278730..1278876 (+)	147	WP_012027144.1	SPJ_0845 family protein	-
NQZ88_RS06515 (NQZ88_06515)	-	1278878..1279783 (+)	906	WP_012027145.1	permease	-
NQZ88_RS06520 (NQZ88_06520)	-	1279780..1280595 (+)	816	WP_012027146.1	TIGR03943 family protein	-
NQZ88_RS06525 (NQZ88_06525)	zwf	1280674..1282161 (+)	1488	WP_012027147.1	glucose-6-phosphate dehydrogenase	-
NQZ88_RS06530 (NQZ88_06530)	-	1282361..1283035 (+)	675	WP_012027148.1	DNA alkylation repair protein	-
NQZ88_RS06535 (NQZ88_06535)	-	1283037..1283594 (+)	558	WP_012027149.1	GNAT family N-acetyltransferase	-
NQZ88_RS06540 (NQZ88_06540)	pilA	1283618..1284892 (-)	1275	WP_257116183.1	signal recognition particle-docking protein FtsY	Machinery gene
NQZ88_RS06545 (NQZ88_06545)	-	1284894..1285706 (-)	813	WP_002936036.1	Cof-type HAD-IIB family hydrolase	-
NQZ88_RS06550 (NQZ88_06550)	-	1285696..1286505 (-)	810	WP_012027151.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47185.61 Da
• Isoelectric Point: 4.4245

>NTDB_id=615685 NQZ88_RS06540 WP_257116183.1 1283618..1284892(-) (pilA) [Streptococcus suis strain DNS11]
MGLFDRLFGQKKQEEQVALVEEVEREQSASSEDTVTTEVESATQEMEKFQSEVAETELTAEQEAQKQRTLDMMAQYYAAK
EAAAARVKEAQEQGFDPAIQTKVKEEPVEEVAPVGQESEQDKYQRTLKKTRTGFGARLNEFFANFRSVDEEFFEELEEML
ILSDVGVQVASTLTEELRYEAKLQNAKKIDELRRVIIEKLVDIYEKDGQFSEQINFQDDLTVMLFVGVNGVGKTTSIGKL
AYKYKQAGKKVMLIAADTFRAGAVAQLVEWGRRVDVPVVTGPEKSDPASVVFDGVKRAVAEGVDILMIDTAGRLQNKENL
MAELEKIGRIIKRTLPDAPHETLLALDASTGQNALSQAKEFAKITPLTGLVLTKLDGTAKGGVVLAIRQELDIPVKLIGF
GEKIDDIGEFKSEEFMRGLLEELV

Nucleotide

• Length: 1275 bp

>NTDB_id=615685 NQZ88_RS06540 WP_257116183.1 1283618..1284892(-) (pilA) [Streptococcus suis strain DNS11]
ATGGGATTATTTGATCGATTATTTGGACAAAAAAAACAAGAGGAGCAAGTCGCTCTTGTTGAAGAAGTGGAAAGGGAGCA
GTCGGCTTCTAGCGAAGATACAGTAACTACTGAAGTTGAGTCAGCTACTCAAGAAATGGAAAAGTTCCAGTCTGAAGTAG
CAGAGACTGAATTGACAGCCGAACAAGAAGCTCAGAAACAACGGACCTTAGACATGATGGCTCAATATTATGCAGCCAAA
GAAGCCGCTGCGGCTCGAGTGAAGGAAGCGCAGGAACAAGGCTTTGACCCTGCTATTCAAACCAAGGTCAAGGAAGAGCC
TGTTGAGGAAGTTGCTCCAGTAGGACAAGAAAGTGAACAGGACAAGTACCAGCGTACCTTGAAAAAGACGCGTACAGGAT
TTGGGGCAAGGCTCAATGAATTCTTTGCCAATTTCCGTTCGGTTGATGAAGAATTTTTCGAAGAGTTGGAAGAAATGCTG
ATTTTGTCAGACGTAGGTGTGCAAGTTGCTTCTACGCTGACAGAGGAGCTCCGCTATGAAGCCAAGCTACAAAATGCCAA
GAAGATAGATGAACTCCGTCGTGTTATCATCGAAAAATTGGTGGATATTTACGAAAAAGACGGTCAATTCAGTGAGCAAA
TCAATTTCCAAGATGATTTGACAGTCATGCTCTTTGTCGGTGTCAACGGTGTTGGGAAGACGACGTCTATCGGTAAGTTA
GCCTACAAGTACAAGCAAGCTGGCAAGAAGGTCATGTTGATCGCAGCGGACACCTTCCGTGCGGGTGCGGTAGCCCAGCT
GGTCGAGTGGGGTCGCCGTGTCGATGTGCCAGTAGTCACAGGACCTGAAAAGTCAGACCCAGCTAGTGTGGTTTTTGATG
GGGTAAAACGTGCCGTGGCAGAAGGCGTGGATATTCTCATGATTGATACAGCAGGTCGCTTGCAAAATAAAGAAAACCTC
ATGGCAGAGCTGGAAAAAATCGGTCGCATCATCAAACGGACCCTACCTGATGCACCGCATGAAACCCTCTTAGCACTGGA
TGCCTCCACAGGTCAAAACGCCCTCAGTCAAGCCAAGGAATTTGCAAAAATTACTCCATTGACTGGGCTAGTCTTGACCA
AGCTAGACGGTACAGCCAAGGGTGGTGTCGTTCTTGCCATCCGTCAGGAACTGGATATACCAGTTAAGCTAATTGGTTTC
GGTGAGAAAATCGATGACATCGGTGAATTCAAATCCGAAGAATTCATGCGTGGGCTATTGGAAGAATTGGTATAG

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (221-420)

• SRP54-type protein, helical bundle domain (SRP54_N) (134-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	36.322	100	0.373