Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   NQZ91_RS03250 Genome accession   NZ_CP102145
Coordinates   672121..672600 (+) Length   159 a.a.
NCBI ID   WP_257117854.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 667121..677600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS03220 (NQZ91_03220) - 667179..668330 (+) 1152 WP_105122765.1 cobalamin-independent methionine synthase II family protein -
  NQZ91_RS03225 (NQZ91_03225) - 668438..669748 (-) 1311 WP_257104334.1 GntP family permease -
  NQZ91_RS03230 (NQZ91_03230) folK 669790..670278 (-) 489 WP_257104333.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  NQZ91_RS03235 (NQZ91_03235) folB 670275..670637 (-) 363 WP_257117852.1 dihydroneopterin aldolase -
  NQZ91_RS03240 (NQZ91_03240) folP 670630..671442 (-) 813 WP_257104332.1 dihydropteroate synthase -
  NQZ91_RS03245 (NQZ91_03245) folE 671451..672011 (-) 561 WP_105138118.1 GTP cyclohydrolase I FolE -
  NQZ91_RS03250 (NQZ91_03250) mutX 672121..672600 (+) 480 WP_257117854.1 8-oxo-dGTP diphosphatase Machinery gene
  NQZ91_RS03255 (NQZ91_03255) - 672646..673911 (-) 1266 WP_172023055.1 toxic anion resistance protein -
  NQZ91_RS03260 (NQZ91_03260) - 673913..674734 (-) 822 WP_257117855.1 hypothetical protein -
  NQZ91_RS03265 (NQZ91_03265) - 674826..675482 (-) 657 WP_105110481.1 CBS domain-containing protein -
  NQZ91_RS03270 (NQZ91_03270) - 675714..676082 (-) 369 WP_105161179.1 glyoxalase -
  NQZ91_RS03275 (NQZ91_03275) - 676153..676452 (-) 300 WP_105110483.1 lipopolysaccharide assembly LapA domain-containing protein -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18443.83 Da        Isoelectric Point: 4.4799

>NTDB_id=615453 NQZ91_RS03250 WP_257117854.1 672121..672600(+) (mutX) [Streptococcus suis strain DNS20]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHRGKWIGVGGKLEAGETPQACATREVLEETGLTATKLALKGIITFPDF
TPNMDWYTYVFKITEFEGNLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLENKPFFSACFRYDGDNLLDYSVDFYE

Nucleotide


Download         Length: 480 bp        

>NTDB_id=615453 NQZ91_RS03250 WP_257117854.1 672121..672600(+) (mutX) [Streptococcus suis strain DNS20]
ATGACCAAGAAACCCGTCCAGTTAGCGACGATTTGCTATATTGACAATGGCAAGGAATTTTTATTACTTCACCGCAACAA
GAAAGAAAATGATGTGCATCGCGGCAAGTGGATTGGCGTCGGCGGAAAATTAGAAGCCGGTGAGACCCCTCAGGCCTGCG
CAACCCGTGAAGTCTTGGAAGAGACAGGCCTTACGGCCACCAAGTTGGCTCTGAAAGGCATTATTACCTTCCCTGACTTC
ACCCCCAATATGGATTGGTACACCTATGTCTTCAAGATTACCGAGTTTGAAGGCAACCTAATCGACTGTAACGAAGGAGA
TTTGGAGTGGGTACCCTATGACCAGGTCCTATCCAAGCCCACCTGGGAAGGCGATCGGCATTTCCAAGAATGGCTCTTAG
AAAACAAGCCCTTCTTCTCCGCCTGTTTCCGCTATGACGGAGATAACTTACTAGACTACTCAGTGGATTTTTATGAGTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

96.226

0.78