Detailed information    

insolico Bioinformatically predicted

Overview

Name   xerS   Type   Machinery gene
Locus tag   NQZ91_RS01575 Genome accession   NZ_CP102145
Coordinates   320279..321349 (+) Length   356 a.a.
NCBI ID   WP_257104510.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 315279..326349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS01555 (NQZ91_01555) - 316399..317850 (+) 1452 WP_257117698.1 alpha-amylase -
  NQZ91_RS01560 (NQZ91_01560) - 318131..318517 (+) 387 Protein_307 glucosaminidase domain-containing protein -
  NQZ91_RS01565 (NQZ91_01565) - 318760..319407 (+) 648 WP_257117700.1 SatD family protein -
  NQZ91_RS01570 (NQZ91_01570) - 319448..319882 (-) 435 WP_257104511.1 N-acetyltransferase -
  NQZ91_RS01575 (NQZ91_01575) xerS 320279..321349 (+) 1071 WP_257104510.1 tyrosine recombinase XerS Machinery gene
  NQZ91_RS01580 (NQZ91_01580) - 321444..322067 (+) 624 WP_257117702.1 YitT family protein -
  NQZ91_RS01585 (NQZ91_01585) - 322166..323458 (-) 1293 WP_257117704.1 hypothetical protein -
  NQZ91_RS01590 (NQZ91_01590) - 323626..325131 (-) 1506 WP_257117705.1 phosphomannomutase/phosphoglucomutase -
  NQZ91_RS01595 (NQZ91_01595) - 325192..326130 (-) 939 WP_257117706.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 41637.96 Da        Isoelectric Point: 9.5313

>NTDB_id=615439 NQZ91_RS01575 WP_257104510.1 320279..321349(+) (xerS) [Streptococcus suis strain DNS20]
MRRELLLEKIEELKEIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLEYVKTEYENKLSNRAKSSFRKNKERDLAILALLLASGVRLSEAVNLDLKDVNLKLMIIEVTRKGGKRDS
VNIAGFAKPYLEAYMTIRQQRYKAEKTDVAFFLSEYRGMPNRMDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDKL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=615439 NQZ91_RS01575 WP_257104510.1 320279..321349(+) (xerS) [Streptococcus suis strain DNS20]
ATGCGTCGTGAATTATTATTGGAAAAAATTGAGGAATTGAAAGAAATCATGCCTTGGTATGTCTTGGATTATTACCAATC
CAAGTTGGCGGTTCCCTATAGTTTTACAACCCTTTATGAATACCTCAAAGAATATCGTCGTTTTTTTGAGTGGTTACAGG
ATTCAGATTTGGTATCTGTGGAACGGATTGCTGATATTCCGTTGGATATTCTAGAACATTTGACCAAAAAAGATATGGAA
GCCTTCATTCTTTATCTGCGGGAGCGTCCCTTACTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATAAA
CCGCACTCTGTCGGCACTTTCTAGCCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGATCAGGGTGAGCCCTACTTCT
ACCGTAATGTCATGAAAAAGGTGTCGACCAAGAAGAAAAAAGAAACCTTGGCTGCCCGGGCGGAAAATATCAAGCAGAAA
CTCTTTTTGGGCGACGAAACCATGGAATTTCTGGAATACGTGAAAACAGAATACGAAAATAAACTCTCCAACCGTGCAAA
ATCTTCTTTCCGAAAAAATAAGGAGCGTGATTTAGCCATTCTTGCCCTGCTCTTGGCCTCTGGCGTCCGTCTGTCTGAGG
CCGTCAATTTGGACCTCAAGGATGTTAATCTGAAATTGATGATTATCGAAGTCACTCGAAAAGGTGGTAAACGGGATTCT
GTTAATATTGCTGGCTTTGCCAAGCCCTATCTGGAAGCCTATATGACCATCCGGCAGCAACGCTACAAGGCTGAAAAGAC
TGACGTCGCATTCTTTCTGTCCGAATATCGTGGGATGCCCAATCGCATGGATGCCTCTTCTATTGAAAAAATGGTTGCCA
AGTATTCGGCTGATTTCAAAATTCGTGTAACGCCCCACAAACTCCGCCACACACTTGCGACCAGACTCTACGATGCAACC
AAGTCGCAGGTCTTGGTCAGCCATCAACTGGGGCATGCCAATACGCAAGTTACGGATTTGTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCATTGGACAAACTTTAA

Domains

Predicted by InterProScan.

Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4)

(33-122)

Phage integrase family (Phage_integrase)

(182-344)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

81.461

100

0.815