Detailed information NTG0615309

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: LIO33_RS00785
• Genome accession: NZ_CP085088
• Coordinates: 122634..123587 (+)
• Length: 317 a.a.
• NCBI ID: WP_011922562.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ssuis_MA1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 117634..128587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO33_RS00745	-	117904..118847 (-)	944	Protein_114	S66 peptidase family protein	-
LIO33_RS00750	comYA	118933..119883 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
LIO33_RS00755	comYB	119795..120832 (+)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
LIO33_RS00760	comYC	120834..121115 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
LIO33_RS00765	comGD	121096..121503 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
LIO33_RS00770	comYE	121475..121768 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
LIO33_RS00775	comGF/cglF	121755..122189 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
LIO33_RS00780	comGG	122167..122577 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
LIO33_RS00785	comYH	122634..123587 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
LIO33_RS00790	-	123637..124824 (+)	1188	WP_012775422.1	acetate kinase	-
LIO33_RS00795	-	125139..125690 (+)	552	WP_012774908.1	folate family ECF transporter S component	-
LIO33_RS00800	-	125746..127002 (+)	1257	WP_011921729.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
LIO33_RS00805	pepA	127049..128110 (-)	1062	WP_011921730.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35776.92 Da
• Isoelectric Point: 4.5177

>NTDB_id=615309 LIO33_RS00785 WP_011922562.1 122634..123587(+) (comYH) [Streptococcus suis strain Ssuis_MA1]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNATYVAGQHETDLVVKNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPKEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKTAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI

Nucleotide

• Length: 954 bp

>NTDB_id=615309 LIO33_RS00785 WP_011922562.1 122634..123587(+) (comYH) [Streptococcus suis strain Ssuis_MA1]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACTAA
TATCTATGATGCCATGATTGAGCAAAATGCTACTTACGTAGCTGGTCAGCATGAGACGGATCTTGTTGTCAAAAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTATTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGTCCAAAGGAACATACCTACGCCCATCATTTGCTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GACTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (68-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	60.443	99.685	0.603
comYH	Streptococcus mutans UA159	60.127	99.685	0.599