Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | LIO32_RS00390 | Genome accession | NZ_CP085087 |
| Coordinates | 69491..69757 (+) | Length | 88 a.a. |
| NCBI ID | WP_014635810.1 | Uniprot ID | A0A2K1SXG9 |
| Organism | Streptococcus suis strain Ssuis_MA2 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 64491..74757
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIO32_RS00355 | - | 64499..65670 (+) | 1172 | Protein_51 | competence/damage-inducible protein A | - |
| LIO32_RS00360 | recA | 65722..66870 (+) | 1149 | WP_023369045.1 | recombinase RecA | Machinery gene |
| LIO32_RS00365 | spx | 67106..67504 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| LIO32_RS00370 | - | 67604..67870 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| LIO32_RS00375 | ruvX | 67870..68289 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| LIO32_RS00380 | - | 68301..68633 (+) | 333 | WP_074389614.1 | DUF1292 domain-containing protein | - |
| LIO32_RS00385 | - | 68840..69418 (+) | 579 | WP_012774895.1 | nucleotidyltransferase family protein | - |
| LIO32_RS00390 | comX/sigX | 69491..69757 (+) | 267 | WP_014635810.1 | hypothetical protein | Regulator |
| LIO32_RS00395 | rpsJ | 70080..70388 (+) | 309 | WP_014735259.1 | 30S ribosomal protein S10 | - |
| LIO32_RS00400 | rplC | 70525..71151 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| LIO32_RS00405 | rplD | 71176..71799 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| LIO32_RS00410 | - | 71799..72098 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| LIO32_RS00415 | rplB | 72116..72949 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| LIO32_RS00420 | rpsS | 73200..73481 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| LIO32_RS00425 | rplV | 73499..73843 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| LIO32_RS00430 | rpsC | 73856..74509 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10670.50 Da Isoelectric Point: 9.1949
>NTDB_id=615249 LIO32_RS00390 WP_014635810.1 69491..69757(+) (comX/sigX) [Streptococcus suis strain Ssuis_MA2]
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=615249 LIO32_RS00390 WP_014635810.1 69491..69757(+) (comX/sigX) [Streptococcus suis strain Ssuis_MA2]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis isolate S10 |
71.233 |
82.955 |
0.591 |
| comX/sigX | Streptococcus suis P1/7 |
71.233 |
82.955 |
0.591 |