Detailed information NTG0615207

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: LIO31_RS00780
• Genome accession: NZ_CP085086
• Coordinates: 121150..122103 (+)
• Length: 317 a.a.
• NCBI ID: WP_024406069.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ssuis_MA6
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 116150..127103

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO31_RS00740	-	116420..117363 (-)	944	Protein_113	S66 peptidase family protein	-
LIO31_RS00745	comYA	117449..118399 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
LIO31_RS00750	comYB	118311..119348 (+)	1038	WP_256770774.1	competence type IV pilus assembly protein ComGB	Machinery gene
LIO31_RS00755	comYC	119350..119631 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
LIO31_RS00760	comGD	119612..120019 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
LIO31_RS00765	comYE	119991..120284 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
LIO31_RS00770	comGF/cglF	120271..120705 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
LIO31_RS00775	comGG	120683..121093 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
LIO31_RS00780	comYH	121150..122103 (+)	954	WP_024406069.1	class I SAM-dependent methyltransferase	Machinery gene
LIO31_RS00785	-	122153..123340 (+)	1188	WP_012775473.1	acetate kinase	-
LIO31_RS00790	-	123654..124205 (+)	552	WP_012775474.1	folate family ECF transporter S component	-
LIO31_RS00795	-	124261..125517 (+)	1257	WP_012775475.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
LIO31_RS00800	pepA	125562..126623 (-)	1062	WP_012775476.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35746.90 Da
• Isoelectric Point: 4.5177

>NTDB_id=615207 LIO31_RS00780 WP_024406069.1 121150..122103(+) (comYH) [Streptococcus suis strain Ssuis_MA6]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNATYVAGQHETDLVVKNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPKEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI

Nucleotide

• Length: 954 bp

>NTDB_id=615207 LIO31_RS00780 WP_024406069.1 121150..122103(+) (comYH) [Streptococcus suis strain Ssuis_MA6]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTACTTACGTAGCTGGTCAGCATGAGACGGATCTTGTTGTCAAAAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTATTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTCTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGTCCAAAGGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTGAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (68-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	60.443	99.685	0.603
comYH	Streptococcus mutans UA159	60.127	99.685	0.599