Detailed information    

insolico Bioinformatically predicted

Overview


Name   xerS   Type   Machinery gene
Locus tag   NQZ97_RS06255 Genome accession   NZ_CP102136
Coordinates   1252146..1253216 (-) Length   356 a.a.
NCBI ID   WP_043024855.1    Uniprot ID   -
Organism   Streptococcus suis strain M105052_S26     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1247146..1258216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ97_RS11870 - 1247279..1247586 (-) 308 Protein_1203 hypothetical protein -
  NQZ97_RS06240 (NQZ97_06240) - 1247695..1248816 (+) 1122 WP_257110454.1 IS110 family transposase -
  NQZ97_RS06245 (NQZ97_06245) - 1249191..1250385 (-) 1195 Protein_1205 IS1182 family transposase -
  NQZ97_RS06250 (NQZ97_06250) - 1250568..1252076 (+) 1509 WP_125177441.1 phosphomannomutase/phosphoglucomutase -
  NQZ97_RS06255 (NQZ97_06255) xerS 1252146..1253216 (-) 1071 WP_043024855.1 tyrosine recombinase XerS Machinery gene
  NQZ97_RS06260 (NQZ97_06260) - 1253450..1253695 (-) 246 WP_043024856.1 zinc-ribbon domain-containing protein -
  NQZ97_RS06265 (NQZ97_06265) - 1253883..1255025 (+) 1143 WP_043024857.1 DNA adenine methylase -
  NQZ97_RS06270 (NQZ97_06270) - 1255065..1255310 (-) 246 WP_043024858.1 hypothetical protein -
  NQZ97_RS06275 (NQZ97_06275) - 1255322..1256059 (-) 738 WP_202836874.1 site-specific DNA-methyltransferase -
  NQZ97_RS06280 (NQZ97_06280) - 1256075..1256914 (-) 840 WP_043024859.1 hypothetical protein -
  NQZ97_RS06285 (NQZ97_06285) - 1257077..1257952 (-) 876 WP_257110455.1 TdeIII family type II restriction endonuclease -
  NQZ97_RS06290 (NQZ97_06290) - 1257949..1258161 (-) 213 WP_043024861.1 helix-turn-helix domain-containing protein -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 41561.71 Da        Isoelectric Point: 9.2076

>NTDB_id=614900 NQZ97_RS06255 WP_043024855.1 1252146..1253216(-) (xerS) [Streptococcus suis strain M105052_S26]
MRRELLLEKIEQLKEIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=614900 NQZ97_RS06255 WP_043024855.1 1252146..1253216(-) (xerS) [Streptococcus suis strain M105052_S26]
ATGCGTCGTGAATTATTATTAGAAAAAATTGAACAGCTAAAAGAAATCATGCCTTGGTATGTCTTGGAATATTACCAATC
AAAGCTGGCTGTGCCTTACAGTTTTACAACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTGCAGG
ATTCGGATTTGGTATCTGTGGAACGGATTGCTGACATTCCGTTGGATATTCTGGAACATTTGACCAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCCTACTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGCACTCTGTCAGCACTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGATCAGGGTGAGCCCTACTTCT
ATCGCAATGTTATGAAAAAGGTATCCACCAAGAAGAAGAAGGAAACCTTGGCGGCTCGGGCGGAGAATATCAAGCAGAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTTTTGGACTATGTGGACAAGGAATACCAGGTCAATCTCTCCAAACGTGCCCT
CTCCTCCTTCCAAAAAAACAAGGAACGAGACTTGGCGATTTTGGCACTTCTCTTGGCATCTGGTGTTCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGTGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTATCTGGAAGCCTATATGAGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACGGCCTTTTTCCTGTCTGAGTACCGTGGTCTGCCTAACCGCATCGACGCTTCTTCCATTGAAAAAATGGTGGCTA
AGTATTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGCCATACCTTGGCAACTCGCCTCTACGACGCCACC
AAGTCGCAAGTTCTGGTCAGTCACCAGCTGGGTCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAGCAAAAAAATGCACTGGATCAATTATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

83.146

100

0.831