Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   NQZ97_RS04745 Genome accession   NZ_CP102136
Coordinates   963803..964285 (-) Length   160 a.a.
NCBI ID   WP_043026302.1    Uniprot ID   -
Organism   Streptococcus suis strain M105052_S26     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 958803..969285
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ97_RS04720 (NQZ97_04720) pheT 959108..961507 (+) 2400 WP_256787299.1 phenylalanine--tRNA ligase subunit beta -
  NQZ97_RS04725 (NQZ97_04725) - 961562..961828 (+) 267 WP_256787300.1 DUF2087 domain-containing protein -
  NQZ97_RS04730 (NQZ97_04730) - 961849..962151 (-) 303 WP_002938072.1 hypothetical protein -
  NQZ97_RS04735 (NQZ97_04735) - 962347..963090 (+) 744 WP_125168893.1 polyphosphate polymerase domain-containing protein -
  NQZ97_RS04740 (NQZ97_04740) - 963077..963754 (+) 678 WP_043026304.1 DUF4956 domain-containing protein -
  NQZ97_RS04745 (NQZ97_04745) mutX 963803..964285 (-) 483 WP_043026302.1 8-oxo-dGTP diphosphatase Machinery gene
  NQZ97_RS04750 (NQZ97_04750) folE 964443..965006 (+) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  NQZ97_RS04755 (NQZ97_04755) folP 965015..965827 (+) 813 WP_043026300.1 dihydropteroate synthase -
  NQZ97_RS04760 (NQZ97_04760) folB 965820..966182 (+) 363 WP_043026298.1 dihydroneopterin aldolase -
  NQZ97_RS04765 (NQZ97_04765) folK 966179..966679 (+) 501 WP_043026296.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  NQZ97_RS04770 (NQZ97_04770) - 966703..968013 (+) 1311 WP_105130686.1 GntP family permease -
  NQZ97_RS04775 (NQZ97_04775) - 968086..969234 (-) 1149 WP_170238112.1 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18587.90 Da        Isoelectric Point: 4.4960

>NTDB_id=614891 NQZ97_RS04745 WP_043026302.1 963803..964285(-) (mutX) [Streptococcus suis strain M105052_S26]
MTKKTVQLATICYIDNGKEYLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGNLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=614891 NQZ97_RS04745 WP_043026302.1 963803..964285(-) (mutX) [Streptococcus suis strain M105052_S26]
ATGACCAAAAAAACTGTCCAACTGGCTACGATTTGCTACATTGATAATGGTAAGGAATATCTTCTCCTTCATCGAAACAA
GAAAGAAAATGACGTCCATCAAGGAAAATGGATTGGAGTTGGTGGCAAACTGGAGCCTGGTGAAACACCGCAAGCTTGTG
CCATTCGCGAGGTCTTTGAGGAAACTGGACTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATTACGGGTTTTGAAGGAAATCTTATTGATTGCAACGAAGGCGA
TTTAGAATGGGTTCCTTATGACCAAGTGCTCTCCAAACCAACCTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAACTGCTTGATTATAGCGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

95.625

0.775