Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   NQZ98_RS06075 Genome accession   NZ_CP102135
Coordinates   1192986..1193468 (+) Length   160 a.a.
NCBI ID   WP_024400725.1    Uniprot ID   -
Organism   Streptococcus suis strain M106471_S40     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1187986..1198468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ98_RS06050 (NQZ98_06050) - 1189234..1190544 (-) 1311 WP_024400721.1 GntP family permease -
  NQZ98_RS06055 (NQZ98_06055) folK 1190595..1191083 (-) 489 WP_024400722.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  NQZ98_RS06060 (NQZ98_06060) folB 1191080..1191442 (-) 363 WP_024400723.1 dihydroneopterin aldolase -
  NQZ98_RS06065 (NQZ98_06065) folP 1191435..1192247 (-) 813 WP_171997218.1 dihydropteroate synthase -
  NQZ98_RS06070 (NQZ98_06070) folE 1192256..1192819 (-) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  NQZ98_RS06075 (NQZ98_06075) mutX 1192986..1193468 (+) 483 WP_024400725.1 8-oxo-dGTP diphosphatase Machinery gene
  NQZ98_RS06080 (NQZ98_06080) - 1193512..1194189 (-) 678 WP_044772877.1 DUF4956 domain-containing protein -
  NQZ98_RS06085 (NQZ98_06085) - 1194176..1194919 (-) 744 WP_012027116.1 polyphosphate polymerase domain-containing protein -
  NQZ98_RS06090 (NQZ98_06090) - 1195112..1195414 (+) 303 WP_044753544.1 hypothetical protein -
  NQZ98_RS06095 (NQZ98_06095) - 1195435..1195608 (-) 174 Protein_1157 DUF2087 domain-containing protein -
  NQZ98_RS06100 (NQZ98_06100) pheT 1195808..1198207 (-) 2400 WP_024400730.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18440.77 Da        Isoelectric Point: 4.5422

>NTDB_id=614808 NQZ98_RS06075 WP_024400725.1 1192986..1193468(+) (mutX) [Streptococcus suis strain M106471_S40]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQAWLLENKPFFSACFRYDGDSLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=614808 NQZ98_RS06075 WP_024400725.1 1192986..1193468(+) (mutX) [Streptococcus suis strain M106471_S40]
ATGACCAAGAAACCCGTCCAACTCGCTACGATTTGCTACATTGATAATGGTAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAACGATGTCCATCAAGGAAAATGGATTGGAGTTGGTGGTAAACTAGAACCTGGCGAAACACCACAGGCTTGTG
CCATTCGAGAAGTCTTTGAGGAAACTGGGCTTACTGTAACGAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTTTGATCGATTGCAACGAAGGCGA
TTTAGAATGGGTTCCTTATGACCAAGTGCTCTCCAAACCAACTTGGGAAGGCGATCGCCATTTTCAAGCATGGCTATTAG
AGAACAAACCCTTCTTTTCCGCTTGCTTCCGCTATGACGGGGATAGCTTGCTAGATTACAGCGTTGATTTTTATGAGGAG
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

79.085

95.625

0.756