Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LG951_RS05885 Genome accession   NZ_CP085037
Coordinates   1187699..1188364 (+) Length   221 a.a.
NCBI ID   WP_050945278.1    Uniprot ID   -
Organism   Bacillus pumilus strain BIM B-171     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1182699..1193364
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG951_RS05855 (LG951_05855) - 1183031..1184110 (+) 1080 WP_003211577.1 ABC transporter ATP-binding protein -
  LG951_RS05860 (LG951_05860) - 1184112..1185032 (+) 921 WP_050945282.1 ABC transporter ATP-binding protein -
  LG951_RS05865 (LG951_05865) - 1185139..1185426 (+) 288 WP_050945281.1 hypothetical protein -
  LG951_RS05870 (LG951_05870) - 1185564..1186142 (+) 579 WP_058014295.1 GNAT family N-acetyltransferase -
  LG951_RS05875 (LG951_05875) spxA 1186336..1186731 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  LG951_RS05880 (LG951_05880) - 1186771..1187436 (-) 666 WP_226805017.1 TerC family protein -
  LG951_RS19980 - 1187612..1187732 (+) 121 Protein_1108 hypothetical protein -
  LG951_RS05885 (LG951_05885) mecA 1187699..1188364 (+) 666 WP_050945278.1 adaptor protein MecA Regulator
  LG951_RS05890 (LG951_05890) cls 1188450..1189970 (+) 1521 WP_050945276.1 cardiolipin synthase -
  LG951_RS05895 (LG951_05895) - 1190132..1191292 (+) 1161 WP_226805019.1 competence protein CoiA -
  LG951_RS05900 (LG951_05900) pepF 1191507..1193333 (+) 1827 WP_282959899.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26391.15 Da        Isoelectric Point: 3.9851

>NTDB_id=614808 LG951_RS05885 WP_050945278.1 1187699..1188364(+) (mecA) [Bacillus pumilus strain BIM B-171]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTSSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=614808 LG951_RS05885 WP_050945278.1 1187699..1188364(+) (mecA) [Bacillus pumilus strain BIM B-171]
ATGGAAATCGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAGATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCGCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGACGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCTCAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATATGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

76.923

100

0.769