Detailed information NTG0614727

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: NQZ84_RS08620
• Genome accession: NZ_CP102094
• Coordinates: 1760147..1762972 (-)
• Length: 941 a.a.
• NCBI ID: WP_257047567.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 12RC1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1755147..1767972

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ84_RS08595 (NQZ84_08595)	-	1756093..1757349 (-)	1257	WP_257079067.1	ISL3 family transposase	-
NQZ84_RS08600 (NQZ84_08600)	nusB	1757537..1757956 (-)	420	WP_002938276.1	transcription antitermination factor NusB	-
NQZ84_RS08605 (NQZ84_08605)	-	1757946..1758338 (-)	393	WP_015647326.1	Asp23/Gls24 family envelope stress response protein	-
NQZ84_RS08610 (NQZ84_08610)	efp	1758366..1758923 (-)	558	WP_002942436.1	elongation factor P	-
NQZ84_RS08615 (NQZ84_08615)	-	1758987..1760048 (-)	1062	WP_044676222.1	M24 family metallopeptidase	-
NQZ84_RS08620 (NQZ84_08620)	uvrA	1760147..1762972 (-)	2826	WP_257047567.1	excinuclease ABC subunit UvrA	Machinery gene
NQZ84_RS08625 (NQZ84_08625)	-	1763694..1764638 (+)	945	WP_002939248.1	magnesium transporter CorA family protein	-
NQZ84_RS08630 (NQZ84_08630)	-	1764654..1765310 (+)	657	WP_079395770.1	DUF1129 domain-containing protein	-
NQZ84_RS08635 (NQZ84_08635)	rpsR	1765649..1765888 (-)	240	WP_002939250.1	30S ribosomal protein S18	-
NQZ84_RS08640 (NQZ84_08640)	ssbA	1765921..1766415 (-)	495	WP_002942409.1	single-stranded DNA-binding protein	Machinery gene
NQZ84_RS08645 (NQZ84_08645)	rpsF	1766427..1766717 (-)	291	WP_002942403.1	30S ribosomal protein S6	-
NQZ84_RS08650 (NQZ84_08650)	-	1766889..1767878 (-)	990	WP_044677897.1	lipoate--protein ligase	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 103922.16 Da
• Isoelectric Point: 6.1310

>NTDB_id=614727 NQZ84_RS08620 WP_257047567.1 1760147..1762972(-) (uvrA) [Streptococcus suis strain 12RC1]
MQENIVIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIEGL
SPAISIDQKTTSRNPRSTVGTATEINDYLRLLYARVGVPYCINGHGAIAASSVEQIVDEVLELPERQRLQILAPIVRKKK
GQHKTIFEKIQKDGYVRVRVNGDVYDVSEVPELSKSKAHNIEVVVDRIVIKEGIRSRLFDSIEAALRIADGYVIIDTMDE
KEMLFSEYYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGMKLEVDTDLIVPDASKTLRDGALAPWNPISSNYYPQML
EQAMNHFGVDMDKPFEELTEEEKNLIFNGSDGKEFHFHYENEFGGVRDIDIPFEGLITNINRRYRETNSDYTRTVMKTYM
NELTCGTCHGYRLNDQALSVKVGGEKGLHIGQLSDLSVADHLQVIENLTLSENEATIATPIVKEIKDRLSFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLIVVEHDEDTMREADWLI
DIGPGAGVFGGEIVASGTPAQVAKNKKSITGQYLSGKREIPVPLERRVGNGRFLEVTGAKENNLQDVTVRFPLGKFVAVT
GVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKSISGIEHLDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVFVPCEVCHGHRYNSETLEVHYKEKNIAQVLDMTVNDAVEFF
KHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSLYILDEPTTGLHTEDIAQLLKVLARFVD
DGNTVLVIEHNLDVIKTADHIIDMGPEGGVGGGTVVATGTPEEVAENPASFTGQYLKMKLK

Nucleotide

• Length: 2826 bp

>NTDB_id=614727 NQZ84_RS08620 WP_257047567.1 1760147..1762972(-) (uvrA) [Streptococcus suis strain 12RC1]
ATGCAAGAAAATATTGTGATTCATGGGGCGCGTGCCCATAATTTGAAAAATATTGATGTGACCATTCCGCGTGAGAAGTT
GGTGGTGGTGACTGGTTTGTCGGGGTCTGGTAAGTCGAGTTTGGCTTTTGATACCTTGTATGCCGAAGGCCAACGTCGCT
ATGTGGAGTCCTTGTCTGCCTATGCTCGTCAGTTCTTGGGCAACATGGACAAACCGGATGTGGATTCTATAGAGGGTCTC
AGCCCTGCTATTTCCATTGACCAAAAAACAACCTCGCGGAATCCGCGTTCGACAGTCGGTACAGCGACGGAAATCAATGA
CTATCTCCGTTTGCTCTATGCTCGAGTTGGGGTACCTTACTGTATCAACGGGCATGGTGCCATTGCGGCTTCGTCTGTGG
AGCAAATTGTTGATGAAGTTTTGGAATTGCCAGAGCGTCAACGCTTGCAGATTCTAGCTCCGATTGTTCGTAAGAAAAAG
GGGCAACACAAGACCATTTTTGAGAAAATCCAGAAGGACGGCTATGTTCGGGTGCGGGTCAATGGGGATGTCTATGATGT
GTCGGAAGTGCCTGAGTTGTCCAAGAGTAAGGCTCATAATATTGAAGTCGTGGTCGATCGAATTGTTATAAAAGAAGGTA
TTCGCTCTCGGCTCTTTGACTCGATTGAGGCGGCCCTGCGGATTGCGGACGGCTATGTCATCATCGACACCATGGATGAG
AAGGAAATGCTTTTCTCTGAGTACTATGCGTGTCCAGTTTGTGGCTTTACGGTGCCTGAGTTGGAGCCTCGCCTCTTCTC
TTTCAATGCTCCTTTTGGGTCTTGTAGCGACTGTGACGGTTTGGGCATGAAGCTGGAAGTGGATACGGATTTGATTGTCC
CAGATGCCAGCAAGACCTTGCGTGACGGTGCCTTGGCTCCGTGGAATCCAATCTCATCCAACTACTACCCTCAGATGTTG
GAGCAGGCCATGAATCACTTTGGTGTGGACATGGACAAGCCTTTTGAGGAATTGACAGAAGAGGAGAAGAACCTGATTTT
CAACGGTTCTGACGGGAAAGAATTCCATTTCCATTATGAAAATGAGTTCGGTGGGGTGCGTGATATTGACATTCCATTCG
AGGGCTTGATTACCAACATTAATCGCCGCTATCGTGAAACCAATAGTGATTACACACGGACAGTCATGAAGACTTACATG
AATGAGCTGACCTGTGGGACCTGCCACGGCTATCGCCTCAATGACCAAGCCCTGTCTGTCAAAGTCGGAGGCGAAAAGGG
ACTTCATATCGGACAATTATCAGACTTGTCCGTGGCGGATCATTTGCAAGTCATTGAAAATCTGACCTTGTCTGAAAATG
AAGCCACCATTGCAACACCCATTGTCAAGGAAATCAAGGACCGCCTGTCCTTCCTTAATAACGTTGGTCTCAACTATCTG
ACACTTTCACGAGCAGCGGGGACGCTTTCTGGTGGTGAGAGCCAGCGGATTCGTTTGGCGACTCAGATTGGCTCTAACCT
GTCTGGTGTCCTCTATATTCTGGATGAGCCGTCAATTGGTCTGCACCAGCGGGACAATGATCGTCTCATTGCCAGCCTGA
AAAAGATGCGTGATTTGGGCAATACCTTGATTGTGGTGGAGCATGATGAGGACACCATGCGGGAGGCGGACTGGTTGATT
GACATCGGTCCAGGTGCGGGTGTCTTTGGCGGAGAAATCGTGGCTTCTGGAACGCCTGCCCAAGTGGCTAAAAACAAGAA
ATCCATTACAGGCCAGTACCTGTCTGGTAAACGTGAAATTCCAGTTCCTTTGGAACGTCGTGTTGGCAATGGTCGTTTCC
TGGAGGTAACAGGTGCCAAAGAAAACAACCTGCAAGATGTGACTGTTCGTTTCCCACTTGGGAAATTTGTAGCGGTGACA
GGGGTGTCTGGCTCAGGAAAATCAACCCTGGTCAATTCCATTTTGAAAAAAGCTATTGCTCAGAAACTCAATCGCAATTC
GGACAAGCCAGGTAAGTTCAAGTCCATTTCAGGAATTGAACACTTGGACCGCCTGATTGACATTGACCAAAGCCCGATTG
GACGGACGCCGCGTTCCAACCCAGCTACCTACACAGGTGTTTTTGACGATATTCGGGATTTGTTTGCCCAGACCAATGAA
GCCAAAATCCGTGGCTACAAGAAGGGACGTTTCTCTTTTAACGTCAAAGGTGGACGGTGTGAGGCTTGTTCTGGTGATGG
GATCATCAAGATTGAAATGCACTTCCTGCCAGATGTCTTTGTTCCCTGCGAAGTCTGTCATGGACACCGCTACAACTCGG
AAACCTTGGAAGTACACTACAAGGAGAAAAATATCGCCCAAGTCCTTGATATGACAGTCAATGATGCGGTCGAGTTCTTC
AAACATATTCCAAAAATTGAGCGGAAACTCCGTACCATTCAAGATGTGGGCTTGGGCTACGTTACTCTAGGTCAGCCAGC
AACTACCCTATCTGGTGGGGAAGCCCAGCGGATGAAGTTGGCCTCTGAACTCCACAAGCGGTCAACTGGCAAGTCTTTGT
ATATCTTGGACGAGCCGACGACAGGCTTGCATACGGAGGACATTGCCCAGTTGCTCAAGGTCTTGGCTCGCTTTGTTGAT
GATGGCAATACCGTGCTGGTCATCGAGCACAATCTGGATGTCATCAAGACAGCCGACCACATTATCGACATGGGACCGGA
AGGCGGTGTCGGTGGCGGTACCGTTGTCGCGACAGGAACACCAGAAGAAGTGGCGGAGAACCCAGCCAGCTTTACAGGCC
AGTATCTGAAAATGAAGTTGAAATAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (132-238)

• UvrA DNA-binding domain (UvrA_DNA-bind) (288-396)

• ABC transporter (ABC_tran) (624-860)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	89.043	99.894	0.889
uvrA	Streptococcus pneumoniae TIGR4	89.043	99.894	0.889
uvrA	Streptococcus pneumoniae D39	89.043	99.894	0.889