Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NQZ84_RS04780 Genome accession   NZ_CP102094
Coordinates   963620..964288 (+) Length   222 a.a.
NCBI ID   WP_024381849.1    Uniprot ID   A0ABV2ERC1
Organism   Streptococcus suis strain 12RC1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 958620..969288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ84_RS04750 (NQZ84_04750) - 959715..959855 (+) 141 WP_032536643.1 hypothetical protein -
  NQZ84_RS04755 (NQZ84_04755) - 959868..960257 (+) 390 WP_024395849.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  NQZ84_RS04760 (NQZ84_04760) - 960266..961018 (+) 753 WP_014637922.1 ABC transporter ATP-binding protein -
  NQZ84_RS04765 (NQZ84_04765) - 961019..962989 (+) 1971 WP_257047305.1 ABC transporter permease -
  NQZ84_RS04770 (NQZ84_04770) relB 963080..963331 (+) 252 WP_014637924.1 type II toxin-antitoxin system RelB family antitoxin -
  NQZ84_RS04775 (NQZ84_04775) - 963315..963581 (+) 267 WP_014637925.1 type II toxin-antitoxin system RelE family toxin -
  NQZ84_RS04780 (NQZ84_04780) braR 963620..964288 (+) 669 WP_024381849.1 response regulator transcription factor Regulator
  NQZ84_RS04785 (NQZ84_04785) - 964285..965226 (+) 942 WP_014637927.1 sensor histidine kinase -
  NQZ84_RS04790 (NQZ84_04790) - 965303..966811 (+) 1509 WP_024401231.1 phosphoglucomutase -
  NQZ84_RS04795 (NQZ84_04795) xerS 966874..967944 (-) 1071 WP_044752114.1 tyrosine recombinase XerS Machinery gene
  NQZ84_RS04800 (NQZ84_04800) - 968111..968632 (-) 522 WP_044667745.1 AAA family ATPase -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25564.39 Da        Isoelectric Point: 4.7792

>NTDB_id=614694 NQZ84_RS04780 WP_024381849.1 963620..964288(+) (braR) [Streptococcus suis strain 12RC1]
MMKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFI
SSSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSTDLSIDQFQLSLDGRFSNESEQVQLSPTETKIL
SALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGYLVK

Nucleotide


Download         Length: 669 bp        

>NTDB_id=614694 NQZ84_RS04780 WP_024381849.1 963620..964288(+) (braR) [Streptococcus suis strain 12RC1]
ATGATGAAAAAAGAGAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAGCTCTTGAAGCAGCACCTAGGCAAATC
GTATCAGGTGGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTTGCTGAAATCAAACCAGACTTGGTGCTGATGG
ACATTAGCCTGCCTTATTACAACGGTTTTTACTGGACGACAGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATC
TCCTCTAGCGATGATGAGATGAATGCGGTCATGGCCATGAACATGGGTGGCGATGATTTTGTGTCTAAGCCGTTTTCTCT
GGGGATTTTGGATGCCAAAATCGGCGCCTTCTTGCGTCGGGTTAATCAATTCAGCAAATCAACTGATTTGTCAATTGACC
AGTTCCAGCTTAGTTTGGACGGGCGATTTTCAAATGAATCGGAACAGGTTCAATTATCTCCTACGGAAACCAAGATTTTG
TCAGCCTTACTAGAACGACAAGGGCAGATTGTTAGCAAGGAAGAACTCTTGGAAAAACTCTGGGAAAATGAAGAATTTAT
CGATCAGAATACGCTCAATGTAAACATGACCAGACTGCGTAAGAAGGTGAGCGAAGTCGGGTTTGAACGAATTCATACCG
TTCGTGGCGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.273

99.099

0.468