Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NQZ84_RS02265 Genome accession   NZ_CP102094
Coordinates   445400..446176 (+) Length   258 a.a.
NCBI ID   WP_013730191.1    Uniprot ID   -
Organism   Streptococcus suis strain 12RC1     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 440400..451176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ84_RS02260 (NQZ84_02260) rlmD 444010..445362 (-) 1353 WP_004194110.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  NQZ84_RS02265 (NQZ84_02265) recX 445400..446176 (+) 777 WP_013730191.1 recombination regulator RecX Regulator
  NQZ84_RS02270 (NQZ84_02270) - 446252..446785 (+) 534 WP_004194106.1 nucleoside tri-diphosphate phosphatase -
  NQZ84_RS02275 (NQZ84_02275) - 446843..447160 (+) 318 WP_002942715.1 DUF960 domain-containing protein -
  NQZ84_RS02280 (NQZ84_02280) - 447260..447991 (+) 732 WP_004194101.1 GntR family transcriptional regulator -
  NQZ84_RS02285 (NQZ84_02285) - 448131..448841 (-) 711 WP_015646515.1 GntR family transcriptional regulator -
  NQZ84_RS02290 (NQZ84_02290) - 449063..450835 (+) 1773 WP_044676004.1 glycoside hydrolase family 35 protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30429.95 Da        Isoelectric Point: 9.2585

>NTDB_id=614678 NQZ84_RS02265 WP_013730191.1 445400..446176(+) (recX) [Streptococcus suis strain 12RC1]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDGNYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKPLIDKRLAEEDFSELAGKIGEK
LVGRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDDLIAKELDKQYRKYSRKYEGYELKQRLIQAL
ARKGYDFDRIQTVLRDYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=614678 NQZ84_RS02265 WP_013730191.1 445400..446176(+) (recX) [Streptococcus suis strain 12RC1]
ATGAGAATTACAAAAATTGAAAAGAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTGTATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGAAATCACGGAGCAGGAGTTTCGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCTTTCAAGCAACGTACCAAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTCAAGATTGTGACGGTATTAGAAGAGGAAAAATGGCTGGACGATGGGAA
CTATGTTGATAGCTATGTTCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGTCAGAAGTTGATGCAGA
AAGGAATTCCTAAACCGCTGATTGATAAAAGGCTGGCTGAGGAAGATTTTTCAGAGCTTGCTGGGAAGATTGGGGAGAAA
TTGGTGGGTAGATACCAAAGAAAGTTGCCTCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGTAAGGGGTT
TTCTTATGAGACGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAAGAAAATGAAGATGATTTAATCGCCA
AGGAATTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTATGAATTGAAGCAAAGGTTGATACAGGCTTTG
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGACGGTCCTTCGTGATTATCTGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.206

100

0.364