Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   LG296_RS17745 Genome accession   NZ_CP085009
Coordinates   3593758..3594714 (-) Length   318 a.a.
NCBI ID   WP_107934753.1    Uniprot ID   A0A318TP92
Organism   Ureibacillus chungkukjangi strain SLM-173     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3588758..3599714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG296_RS17720 (LG296_17650) - 3589644..3590261 (-) 618 WP_107934758.1 phosphatase PAP2 family protein -
  LG296_RS17725 (LG296_17655) - 3590423..3590755 (-) 333 WP_107934757.1 antibiotic biosynthesis monooxygenase -
  LG296_RS17730 (LG296_17660) - 3590822..3591862 (-) 1041 WP_107934756.1 siderophore ABC transporter substrate-binding protein -
  LG296_RS17735 (LG296_17665) - 3592051..3592818 (-) 768 WP_107934755.1 ABC transporter ATP-binding protein -
  LG296_RS17740 (LG296_17670) - 3592815..3593771 (-) 957 WP_107934754.1 iron chelate uptake ABC transporter family permease subunit -
  LG296_RS17745 (LG296_17675) ceuB 3593758..3594714 (-) 957 WP_107934753.1 ABC transporter permease Machinery gene
  LG296_RS17750 (LG296_17680) - 3594909..3595763 (-) 855 WP_107934752.1 DUF6612 family protein -
  LG296_RS17755 (LG296_17685) - 3595885..3597372 (-) 1488 WP_107934751.1 peptide MFS transporter -
  LG296_RS17760 (LG296_17690) hflX 3597659..3598945 (-) 1287 WP_181417999.1 GTPase HflX -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 35007.43 Da        Isoelectric Point: 9.9459

>NTDB_id=614478 LG296_RS17745 WP_107934753.1 3593758..3594714(-) (ceuB) [Ureibacillus chungkukjangi strain SLM-173]
MRLWMLIIAAIILSFISLFIGAIDIKPSHLLDWDSREMKIFLISRVPRLIAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGILISMLFFTNVTYTQQVIFSFAFALIGTLVFMQILDRIKFKDVIFVPLIGIMYGNILSSITTFFAYEADLL
QNISAWLMGSFTLIIAGRYELLYLSVPAVILAYLYANKFTVAGMGEDFAKNLGLSYKFVLNIGLILVAIIATTVVLTVGV
IPFLGLIVPNIVSLYMGDNLRKTIPHTAVLGIVFLLICDIIGRVIVYPFEIPVNVTVAVIGSAIFLIMLFRGRAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=614478 LG296_RS17745 WP_107934753.1 3593758..3594714(-) (ceuB) [Ureibacillus chungkukjangi strain SLM-173]
ATGAGACTGTGGATGTTAATAATCGCAGCAATCATCCTGTCGTTTATTTCGCTATTTATAGGTGCGATTGATATAAAACC
AAGTCATTTGCTGGATTGGGACTCACGAGAAATGAAAATTTTCTTAATCAGTCGTGTACCGCGTTTAATTGCGATTATTC
TAGCAGGTGCAGGGATGAGTATTGCTGGCTTAATCATGCAAAGCTTAAGTCGAAATAAATTCGTATCCCCAACAACCGCA
GGAACATTAGATGCTGCAAAGTTAGGGATTCTCATTTCGATGTTGTTCTTTACTAATGTAACGTATACACAGCAGGTTAT
TTTTAGCTTTGCGTTTGCATTAATTGGAACTTTAGTTTTCATGCAAATTTTAGATCGTATTAAATTTAAAGATGTGATTT
TCGTACCGCTAATCGGGATAATGTACGGGAACATTTTATCTTCAATTACAACATTTTTTGCATATGAAGCAGACTTGCTT
CAAAATATTAGCGCATGGTTAATGGGTAGCTTTACCTTAATCATTGCAGGACGTTATGAGCTCCTTTACCTGAGTGTACC
AGCCGTTATTTTAGCCTATCTTTATGCTAATAAGTTCACAGTTGCCGGTATGGGAGAGGACTTTGCAAAAAACCTGGGCT
TAAGCTATAAATTTGTCCTTAATATTGGACTAATTCTTGTAGCAATTATTGCAACTACTGTTGTACTGACAGTCGGAGTT
ATACCATTTTTAGGGCTAATAGTACCAAACATTGTTTCTTTATATATGGGAGATAACTTGCGTAAAACCATTCCACATAC
CGCTGTATTAGGAATCGTTTTCCTATTAATCTGTGACATTATTGGACGAGTGATAGTTTATCCATTTGAAATACCTGTAA
ATGTTACTGTGGCTGTTATTGGCAGTGCCATCTTCTTAATTATGTTATTTAGGGGGAGAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A318TP92

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.371

0.531