Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   NQD69_RS06525 Genome accession   NZ_CP101992
Coordinates   1254390..1254872 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain BCJB3586     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1249390..1259872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQD69_RS06505 (NQD69_06520) alsS 1249649..1251331 (-) 1683 WP_000140344.1 acetolactate synthase AlsS -
  NQD69_RS06510 (NQD69_06525) - 1251441..1252667 (-) 1227 WP_000934879.1 hypothetical protein -
  NQD69_RS06515 (NQD69_06530) - 1252657..1253847 (-) 1191 WP_001081535.1 AI-2E family transporter -
  NQD69_RS06520 (NQD69_06535) - 1253939..1254400 (-) 462 WP_000796051.1 NUDIX hydrolase -
  NQD69_RS06525 (NQD69_06540) mutX 1254390..1254872 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  NQD69_RS06530 (NQD69_06545) hylB 1255090..1258308 (+) 3219 WP_000403391.1 hyaluronate lyase -
  NQD69_RS06535 (NQD69_06550) rfbB 1258360..1259406 (-) 1047 WP_000134275.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=614096 NQD69_RS06525 WP_000163512.1 1254390..1254872(-) (mutX) [Streptococcus agalactiae strain BCJB3586]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=614096 NQD69_RS06525 WP_000163512.1 1254390..1254872(-) (mutX) [Streptococcus agalactiae strain BCJB3586]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAATGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACTTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712