Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   LG653_RS00275 Genome accession   NZ_CP084921
Coordinates   52833..53717 (-) Length   294 a.a.
NCBI ID   WP_005804631.1    Uniprot ID   A0A009MW24
Organism   Acinetobacter pittii strain CEP14     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 47833..58717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG653_RS00260 (LG653_00260) miaB 49718..51169 (+) 1452 WP_002119558.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  LG653_RS00265 (LG653_00265) phoL 51207..52295 (+) 1089 WP_226789389.1 PhoH family protein -
  LG653_RS00270 (LG653_00270) ybeY 52305..52781 (+) 477 WP_005804632.1 rRNA maturation RNase YbeY -
  LG653_RS00275 (LG653_00275) tonB2 52833..53717 (-) 885 WP_005804631.1 TonB family protein Machinery gene
  LG653_RS00280 (LG653_00280) - 53950..54621 (+) 672 WP_017386970.1 hypothetical protein -
  LG653_RS00285 (LG653_00285) - 54780..55493 (+) 714 WP_002119525.1 DUF3108 domain-containing protein -
  LG653_RS00290 (LG653_00290) xpt 55566..56141 (+) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  LG653_RS00295 (LG653_00295) wrbA 56194..56796 (-) 603 WP_226789390.1 NAD(P)H:quinone oxidoreductase -
  LG653_RS00300 (LG653_00300) - 57158..58405 (+) 1248 WP_002119535.1 YihY family inner membrane protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33668.20 Da        Isoelectric Point: 7.2966

>NTDB_id=614059 LG653_RS00275 WP_005804631.1 52833..53717(-) (tonB2) [Acinetobacter pittii strain CEP14]
MLNKRSLSIEPFHHWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVHQADFLAQADQQGSGA
FREAHRTSSDTPNPMLNDASTGDTELESLQKIHQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=614059 LG653_RS00275 WP_005804631.1 52833..53717(-) (tonB2) [Acinetobacter pittii strain CEP14]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATCATTGGTGGCAAGACCGAGTCTTTATTGCTGCAACAATATT
GGCAATCTTACTGCATATTTTTGTGTTGCTCATTCACTTTGCCATGCCTAGCCCATCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTCATCAGGCAGATTTTTTGGCACAAGCAGATCAGCAAGGCTCGGGCGCA
TTTCGTGAAGCTCATCGGACTTCTAGTGATACTCCAAATCCGATGCTCAATGATGCTTCAACTGGAGATACTGAGTTAGA
AAGTTTGCAAAAGATTCATCAACAAAGAGAGCTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAACTACAAAGTCAATTTCAAGCAAAAGCTGCCATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAAATTAAAACAGTAGATGGTATTCAAGCAAA
GAAAGATGCTTCAGCTATTTATTTAGATAAATTTCGTGAAAAAGTAGAGCTTTACGGTAATCGCTATTACCCTGAAGAAG
CCAAACAGCAACAGCTAAGAGGTGAAGTGCGTTTAATGGTTATTTTGAATGCTCAAGGGGGAATTCGTGCAATCCGTCTG
CTTGAAAGTTCAGGGCATTCAATACTAGACGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCCAATATGAAAGATATTTCGGAGTTGCGTATTGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009MW24

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

88.095

100

0.881