Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   NQD70_RS06700 Genome accession   NZ_CP101991
Coordinates   1275920..1276402 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain BCJB4361     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1270920..1281402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQD70_RS06680 (NQD70_06675) alsS 1271179..1272861 (-) 1683 WP_000140341.1 acetolactate synthase AlsS -
  NQD70_RS06685 (NQD70_06680) - 1272971..1274197 (-) 1227 WP_000934868.1 hypothetical protein -
  NQD70_RS06690 (NQD70_06685) - 1274187..1275377 (-) 1191 WP_001075588.1 AI-2E family transporter -
  NQD70_RS06695 (NQD70_06690) - 1275469..1275930 (-) 462 WP_000796047.1 NUDIX hydrolase -
  NQD70_RS06700 (NQD70_06695) mutX 1275920..1276402 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  NQD70_RS06705 (NQD70_06700) hylB 1276619..1279837 (+) 3219 WP_000403410.1 hyaluronate lyase -
  NQD70_RS06710 (NQD70_06705) rfbB 1279889..1280935 (-) 1047 WP_000134275.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=613991 NQD70_RS06700 WP_000163512.1 1275920..1276402(-) (mutX) [Streptococcus agalactiae strain BCJB4361]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=613991 NQD70_RS06700 WP_000163512.1 1275920..1276402(-) (mutX) [Streptococcus agalactiae strain BCJB4361]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCATCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712