Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NQD70_RS05700 Genome accession   NZ_CP101991
Coordinates   1076568..1077236 (+) Length   222 a.a.
NCBI ID   WP_000076874.1    Uniprot ID   X5JZS1
Organism   Streptococcus agalactiae strain BCJB4361     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1071568..1082236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQD70_RS05680 (NQD70_05680) - 1072107..1072595 (-) 489 WP_001140791.1 PASTA domain-containing protein -
  NQD70_RS05685 (NQD70_05685) - 1072761..1073723 (+) 963 WP_001253125.1 S41 family peptidase -
  NQD70_RS05690 (NQD70_05690) - 1073749..1074501 (+) 753 WP_000923535.1 ABC transporter ATP-binding protein -
  NQD70_RS05695 (NQD70_05695) - 1074503..1076458 (+) 1956 WP_000499548.1 FtsX-like permease family protein -
  NQD70_RS05700 (NQD70_05700) braR 1076568..1077236 (+) 669 WP_000076874.1 response regulator transcription factor Regulator
  NQD70_RS05705 (NQD70_05705) - 1077233..1078171 (+) 939 WP_000620981.1 HAMP domain-containing sensor histidine kinase -
  NQD70_RS05710 (NQD70_05710) xerS 1078214..1079284 (-) 1071 WP_000817931.1 tyrosine recombinase XerS Machinery gene
  NQD70_RS05715 (NQD70_05715) - 1079669..1081186 (+) 1518 WP_000093964.1 peptide ABC transporter substrate-binding protein -
  NQD70_RS05720 (NQD70_05720) - 1081219..1081992 (-) 774 WP_000622398.1 DUF3307 domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25403.45 Da        Isoelectric Point: 5.0693

>NTDB_id=613982 NQD70_RS05700 WP_000076874.1 1076568..1077236(+) (braR) [Streptococcus agalactiae strain BCJB4361]
MSQEQGKIYIVEDDMTIVSLLKDHLSASYHVSSVSNFRDVKQEIIAFQPDLILMDITLPYFNGFYWTAELRKFLTIPIIF
ISSSNDEMDMVMALNMGGDDFISKPFSLAVLDAKLTAILRRSQQFIQQELTFGGFTLTREGLLSSQDKEVILSPTENKIL
SILLMHPKQVVSKESLLEKLWENDSFIDQNTLNVNMTRLRKKIVPIGFDYIHTVRGVGYLLQ

Nucleotide


Download         Length: 669 bp        

>NTDB_id=613982 NQD70_RS05700 WP_000076874.1 1076568..1077236(+) (braR) [Streptococcus agalactiae strain BCJB4361]
ATGTCACAAGAGCAAGGAAAAATTTATATTGTAGAAGATGATATGACGATTGTGTCACTTTTAAAAGATCATTTATCAGC
TAGCTATCATGTCTCTAGTGTCAGCAATTTTCGTGATGTGAAACAAGAAATTATCGCATTTCAACCCGATTTGATACTAA
TGGATATTACGTTACCCTATTTTAATGGTTTTTACTGGACTGCAGAATTGCGTAAGTTTTTAACAATTCCTATTATTTTC
ATTTCATCTAGTAATGATGAAATGGATATGGTTATGGCATTAAATATGGGGGGTGATGACTTTATTTCAAAACCATTCTC
TCTAGCTGTATTAGATGCTAAGCTAACTGCTATTTTAAGGAGAAGTCAACAATTTATCCAACAGGAATTAACTTTTGGGG
GATTTACGTTGACAAGAGAAGGGTTATTGTCTAGCCAAGATAAAGAGGTTATTTTATCGCCAACAGAAAATAAAATCCTA
TCTATCTTGCTCATGCATCCTAAACAAGTAGTCTCAAAAGAGTCTCTATTAGAGAAACTTTGGGAAAATGATAGTTTTAT
TGATCAAAATACACTTAATGTTAATATGACACGCTTACGTAAAAAAATTGTCCCAATAGGTTTTGATTACATTCATACAG
TGAGAGGAGTTGGGTATTTACTACAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(8-115)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5DCL
  PDB 5DCM

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.198

0.464