Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   NPS18_RS04320 Genome accession   NZ_CP101984
Coordinates   874395..874829 (+) Length   144 a.a.
NCBI ID   WP_002263292.1    Uniprot ID   Q8DUK6
Organism   Streptococcus mutans strain UA-159     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 869395..879829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS18_RS04290 (NPS18_04290) gdhA 869577..870926 (+) 1350 WP_002263849.1 NADP-specific glutamate dehydrogenase -
  NPS18_RS04295 (NPS18_04295) - 871038..871421 (-) 384 WP_002263287.1 DUF3021 family protein -
  NPS18_RS04300 (NPS18_04300) queF 871530..872018 (-) 489 WP_002263288.1 preQ(1) synthase -
  NPS18_RS04305 (NPS18_04305) queE 872031..872747 (-) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  NPS18_RS04310 (NPS18_04310) queD 872744..873190 (-) 447 WP_002263290.1 6-carboxytetrahydropterin synthase QueD -
  NPS18_RS04315 (NPS18_04315) queC 873190..873843 (-) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  NPS18_RS04320 (NPS18_04320) rcrR 874395..874829 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  NPS18_RS04325 (NPS18_04325) rcrP 874833..876635 (+) 1803 WP_002263293.1 ABC transporter ATP-binding protein Regulator
  NPS18_RS04330 (NPS18_04330) rcrQ 876625..878379 (+) 1755 WP_002263294.1 ABC transporter ATP-binding protein Regulator
  NPS18_RS04335 (NPS18_04335) tpx 878576..879061 (+) 486 WP_002263295.1 thiol peroxidase -
  NPS18_RS04340 (NPS18_04340) - 879198..879668 (+) 471 WP_002267997.1 hypothetical protein -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16720.58 Da        Isoelectric Point: 10.5126

>NTDB_id=613609 NPS18_RS04320 WP_002263292.1 874395..874829(+) (rcrR) [Streptococcus mutans strain UA-159]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=613609 NPS18_RS04320 WP_002263292.1 874395..874829(+) (rcrR) [Streptococcus mutans strain UA-159]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGGAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(31-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

100

100

1