Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NP434_RS20605 Genome accession   NZ_CP101936
Coordinates   4028104..4028898 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis subsp. subtilis strain BGSC 10A5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4023104..4033898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP434_RS20580 (NP434_20580) - 4024218..4024901 (-) 684 WP_038428106.1 response regulator transcription factor -
  NP434_RS20585 (NP434_20585) - 4025113..4026012 (+) 900 WP_046381473.1 PepSY domain-containing protein -
  NP434_RS20590 (NP434_20590) - 4026173..4026673 (+) 501 WP_033882751.1 PepSY domain-containing protein -
  NP434_RS20595 (NP434_20595) - 4026670..4026799 (-) 130 Protein_4008 hypothetical protein -
  NP434_RS20600 (NP434_20600) htrA 4026820..4028022 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  NP434_RS20605 (NP434_20605) vicX 4028104..4028898 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  NP434_RS20610 (NP434_20610) walI 4028920..4029762 (-) 843 WP_029318542.1 WalRK two-component regulatory system regulator WalI -
  NP434_RS20615 (NP434_20615) walH 4029749..4031116 (-) 1368 WP_256683132.1 WalRK two-component regulatory system regulator WalH -
  NP434_RS20620 (NP434_20620) walK 4031106..4032941 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  NP434_RS20625 (NP434_20625) walR 4032949..4033656 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=613407 NP434_RS20605 WP_003226939.1 4028104..4028898(-) (vicX) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=613407 NP434_RS20605 WP_003226939.1 4028104..4028898(-) (vicX) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGTGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53