Detailed information NTG0613272

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NP434_RS01755
• Genome accession: NZ_CP101936
• Coordinates: 309836..310957 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain BGSC 10A5
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 304836..315957

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NP434_RS01730 (NP434_01730)	ycdA	304841..305905 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
NP434_RS01735 (NP434_01735)	-	305928..306059 (-)	132	WP_003246334.1	hypothetical protein	-
NP434_RS01740 (NP434_01740)	ycdB	306233..307654 (+)	1422	WP_256683189.1	YcdB/YcdC domain-containing protein	-
NP434_RS01745 (NP434_01745)	ycdC	307841..309202 (+)	1362	WP_010886397.1	YcdB/YcdC domain-containing protein	-
NP434_RS01750 (NP434_01750)	cwlK	309210..309713 (-)	504	WP_116316151.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
NP434_RS01755 (NP434_01755)	rapF	309836..310957 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
NP434_RS01760 (NP434_01760)	ycdF	311064..311840 (+)	777	WP_119898971.1	SDR family oxidoreductase	-
NP434_RS01765 (NP434_01765)	ycdG	311865..313550 (+)	1686	WP_128992375.1	alpha-glucosidase	-
NP434_RS01770 (NP434_01770)	znuA	313737..314696 (+)	960	WP_069322344.1	metal ABC transporter substrate-binding protein	-
NP434_RS01775 (NP434_01775)	znuC	314751..315446 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=613272 NP434_RS01755 WP_015715201.1 309836..310957(+) (rapF) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=613272 NP434_RS01755 WP_015715201.1 309836..310957(+) (rapF) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAGAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACTGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGTAGCGCTTTAGATCATGCCAGACAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGTGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAACT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCTGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405