Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LG401_RS05565 Genome accession   NZ_CP084711
Coordinates   1140323..1140988 (+) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus strain AR03     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1135323..1145988
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG401_RS05535 (LG401_05535) - 1135650..1136729 (+) 1080 WP_034663262.1 ABC transporter ATP-binding protein -
  LG401_RS05540 (LG401_05540) - 1136731..1137651 (+) 921 WP_034663259.1 ABC transporter ATP-binding protein -
  LG401_RS05545 (LG401_05545) - 1137757..1138044 (+) 288 WP_106031502.1 hypothetical protein -
  LG401_RS05550 (LG401_05550) - 1138181..1138759 (+) 579 WP_106072463.1 GNAT family N-acetyltransferase -
  LG401_RS05555 (LG401_05555) spxA 1138953..1139348 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  LG401_RS05560 (LG401_05560) - 1139395..1140060 (-) 666 WP_060596006.1 TerC family protein -
  LG401_RS18780 - 1140236..1140356 (+) 121 Protein_1039 hypothetical protein -
  LG401_RS05565 (LG401_05565) mecA 1140323..1140988 (+) 666 WP_012009573.1 adaptor protein MecA Regulator
  LG401_RS05570 (LG401_05570) cls 1141074..1142594 (+) 1521 WP_034663247.1 cardiolipin synthase -
  LG401_RS05575 (LG401_05575) - 1142756..1143916 (+) 1161 WP_060596008.1 competence protein CoiA -
  LG401_RS05580 (LG401_05580) pepF 1144131..1145957 (+) 1827 WP_282959334.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=612613 LG401_RS05565 WP_012009573.1 1140323..1140988(+) (mecA) [Bacillus pumilus strain AR03]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=612613 LG401_RS05565 WP_012009573.1 1140323..1140988(+) (mecA) [Bacillus pumilus strain AR03]
ATGGAAATCGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAAATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCTCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGACGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774