Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LGQ02_RS13965 Genome accession   NZ_CP084703
Coordinates   2862783..2863433 (-) Length   216 a.a.
NCBI ID   WP_226514968.1    Uniprot ID   -
Organism   Bacillus shivajii strain JCM 32183     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2857783..2868433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LGQ02_RS13955 (LGQ02_13955) - 2859161..2860417 (-) 1257 WP_226514966.1 competence protein CoiA -
  LGQ02_RS13960 (LGQ02_13960) cls 2861098..2862609 (-) 1512 WP_226514967.1 cardiolipin synthase -
  LGQ02_RS13965 (LGQ02_13965) mecA 2862783..2863433 (-) 651 WP_226514968.1 adaptor protein MecA Regulator
  LGQ02_RS13970 (LGQ02_13970) - 2863831..2864532 (+) 702 WP_226514969.1 TerC family protein -
  LGQ02_RS13975 (LGQ02_13975) spxA 2864714..2865115 (-) 402 WP_226514970.1 transcriptional regulator SpxA -
  LGQ02_RS21330 - 2865846..2865974 (-) 129 WP_264183983.1 hypothetical protein -
  LGQ02_RS13980 (LGQ02_13980) - 2866077..2866652 (-) 576 WP_226514971.1 N-acetyltransferase -
  LGQ02_RS13985 (LGQ02_13985) - 2867040..2868263 (-) 1224 WP_226518322.1 putative glycoside hydrolase -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25214.55 Da        Isoelectric Point: 3.6990

>NTDB_id=612546 LGQ02_RS13965 WP_226514968.1 2862783..2863433(-) (mecA) [Bacillus shivajii strain JCM 32183]
MEIERINDSTVKFFITYNDIERRGFDKDEIWYNRERGEELFFEMMSEVNDQENIEISGPLWVQVHAMDQGLEVIVTQGQV
NDGNVKLEIPLDDEKDEMPVDNNIVDMLDSQFTNDENDLDTDSSLSVVIGFNDLEDVISLSHSFNEDVDTSFYSFENTYY
IFVTLDEKYSDEEQDNLLSRMLEFGYESDITIHRIQEYGNTIIASDALTEIRKQFA

Nucleotide


Download         Length: 651 bp        

>NTDB_id=612546 LGQ02_RS13965 WP_226514968.1 2862783..2863433(-) (mecA) [Bacillus shivajii strain JCM 32183]
ATGGAAATTGAAAGAATTAACGATTCTACTGTGAAGTTTTTTATTACGTATAACGACATAGAGCGTCGAGGATTTGATAA
AGATGAAATTTGGTATAACCGTGAACGTGGAGAAGAATTGTTCTTCGAAATGATGAGTGAAGTAAATGACCAGGAGAATA
TTGAGATCTCAGGGCCATTATGGGTGCAAGTTCATGCAATGGATCAAGGTCTAGAAGTCATTGTGACGCAAGGTCAAGTT
AATGACGGTAACGTAAAACTTGAAATCCCACTCGATGATGAAAAGGATGAAATGCCTGTGGATAATAACATTGTCGATAT
GTTAGACAGTCAATTTACGAATGATGAGAATGATCTAGATACAGATTCTTCTCTTAGTGTTGTTATCGGTTTTAACGATT
TGGAAGATGTCATCTCTCTCAGTCATTCCTTTAATGAAGATGTAGATACTAGCTTTTATTCATTTGAAAATACGTACTAC
ATTTTTGTAACATTAGATGAAAAGTACAGTGACGAAGAACAAGATAATTTATTAAGCCGTATGCTTGAGTTTGGCTATGA
ATCGGATATTACAATTCACCGCATTCAAGAATATGGTAATACAATTATTGCCTCGGATGCTTTAACAGAAATCAGAAAAC
AATTTGCTTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

48.858

100

0.495