Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   EL263_RS09135 Genome accession   NZ_AP018938
Coordinates   1720124..1720834 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain ATCC 49619     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1715124..1725834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL263_RS09115 (SPAT_1730) - 1715665..1715913 (-) 249 WP_000364990.1 YneF family protein -
  EL263_RS09120 (SPAT_1731) treC 1716169..1717794 (-) 1626 WP_000171205.1 alpha,alpha-phosphotrehalase -
  EL263_RS09130 (SPAT_1732) treP 1717972..1719939 (-) 1968 WP_050221119.1 PTS system trehalose-specific EIIBC component -
  EL263_RS09135 (SPAT_1733) treR 1720124..1720834 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  EL263_RS09145 - 1720989..1722315 (+) 1327 Protein_1734 ISL3 family transposase -
  EL263_RS09150 (SPAT_1737) - 1722390..1723316 (-) 927 WP_044812815.1 ATP-binding cassette domain-containing protein -
  EL263_RS09155 (SPAT_1738) amiE 1723327..1724394 (-) 1068 WP_000159553.1 ABC transporter ATP-binding protein Regulator
  EL263_RS09160 (SPAT_1739) amiD 1724403..1725329 (-) 927 WP_000103697.1 oligopeptide ABC transporter permease OppC Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=61249 EL263_RS09135 WP_000760673.1 1720124..1720834(+) (treR) [Streptococcus pneumoniae strain ATCC 49619]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=61249 EL263_RS09135 WP_000760673.1 1720124..1720834(+) (treR) [Streptococcus pneumoniae strain ATCC 49619]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAAGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTCATCCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593

Multiple sequence alignment