Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   NOV99_RS06405 Genome accession   NZ_CP101844
Coordinates   1255762..1256244 (+) Length   160 a.a.
NCBI ID   WP_002938080.1    Uniprot ID   -
Organism   Streptococcus suis strain 2018WUSS151     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1250762..1261244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NOV99_RS06380 (NOV99_06380) - 1252010..1253320 (-) 1311 WP_002938090.1 GntP family permease -
  NOV99_RS06385 (NOV99_06385) folK 1253371..1253859 (-) 489 WP_009910002.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  NOV99_RS06390 (NOV99_06390) folB 1253856..1254218 (-) 363 WP_002938086.1 dihydroneopterin aldolase -
  NOV99_RS06395 (NOV99_06395) folP 1254211..1255023 (-) 813 WP_002938084.1 dihydropteroate synthase -
  NOV99_RS06400 (NOV99_06400) folE 1255032..1255595 (-) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  NOV99_RS06405 (NOV99_06405) mutX 1255762..1256244 (+) 483 WP_002938080.1 8-oxo-dGTP diphosphatase Machinery gene
  NOV99_RS06410 (NOV99_06410) - 1256293..1256970 (-) 678 WP_002938079.1 DUF4956 domain-containing protein -
  NOV99_RS06415 (NOV99_06415) - 1256957..1257700 (-) 744 WP_002938076.1 polyphosphate polymerase domain-containing protein -
  NOV99_RS06420 (NOV99_06420) - 1257893..1258222 (+) 330 WP_105126016.1 hypothetical protein -
  NOV99_RS06425 (NOV99_06425) - 1258367..1259569 (-) 1203 WP_002935596.1 IS110 family transposase -
  NOV99_RS06430 (NOV99_06430) - 1259840..1260106 (-) 267 WP_002938070.1 DUF2087 domain-containing protein -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18496.88 Da        Isoelectric Point: 4.5662

>NTDB_id=611894 NOV99_RS06405 WP_002938080.1 1255762..1256244(+) (mutX) [Streptococcus suis strain 2018WUSS151]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREIFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGGKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=611894 NOV99_RS06405 WP_002938080.1 1255762..1256244(+) (mutX) [Streptococcus suis strain 2018WUSS151]
ATGACCAAGAAACCCGTCCAACTCGCTACGATTTGCTACATTGATAATGGTAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAACGATGTCCATCAAGGAAAATGGATTGGAGTTGGTGGCAAACTAGAACCCGGCGAAACGCCACAGGCTTGTG
CCATTCGAGAAATCTTTGAGGAAACTGGGCTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGGCAAACTGCTTGATTACAGTGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

95.625

0.775