Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LDO17_RS06390 Genome accession   NZ_CP084539
Coordinates   1335281..1335463 (+) Length   60 a.a.
NCBI ID   WP_034314525.1    Uniprot ID   A0A223EEA0
Organism   Peribacillus frigoritolerans strain Ant232     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1330281..1340463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LDO17_RS06375 - 1332925..1333116 (-) 192 WP_048686917.1 YjzD family protein -
  LDO17_RS06380 - 1333411..1334133 (+) 723 WP_048686919.1 alpha/beta hydrolase -
  LDO17_RS06385 - 1334236..1335069 (+) 834 WP_048686921.1 hypothetical protein -
  LDO17_RS06390 comZ 1335281..1335463 (+) 183 WP_034314525.1 ComZ family protein Regulator
  LDO17_RS06395 - 1335506..1335727 (-) 222 WP_048686923.1 hypothetical protein -
  LDO17_RS06400 - 1335930..1336865 (+) 936 WP_034314519.1 beta-ketoacyl-ACP synthase III -
  LDO17_RS06405 fabF 1336916..1338154 (+) 1239 WP_048686925.1 beta-ketoacyl-ACP synthase II -
  LDO17_RS06410 - 1338281..1339045 (+) 765 WP_048686927.1 DUF2268 domain-containing putative Zn-dependent protease -
  LDO17_RS06415 - 1339160..1339915 (+) 756 WP_034314514.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6845.97 Da        Isoelectric Point: 4.4566

>NTDB_id=611758 LDO17_RS06390 WP_034314525.1 1335281..1335463(+) (comZ) [Peribacillus frigoritolerans strain Ant232]
MSSDKTLEFMGIAMKYFPEAKAKLEASGIPFSMEMAEPFMELFKSVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=611758 LDO17_RS06390 WP_034314525.1 1335281..1335463(+) (comZ) [Peribacillus frigoritolerans strain Ant232]
ATGAGTTCAGATAAAACTCTTGAATTTATGGGAATCGCCATGAAATACTTCCCAGAGGCTAAAGCGAAGCTTGAGGCAAG
CGGGATTCCATTTTCAATGGAGATGGCAGAGCCATTCATGGAGCTCTTTAAAAGCGTAATGCAAGAAGCTTATGAGCTTG
GCAAACAAGATGCTCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223EEA0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

64.407

98.333

0.633