Detailed information NTG0611735

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NPO58_RS11675
• Genome accession: NZ_CP101741
• Coordinates: 2345272..2346297 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain FY26
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2340272..2351297

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NPO58_RS11645 (NPO58_11620)	zapB	2340356..2340601 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
NPO58_RS11650 (NPO58_11625)	rraA	2340686..2341171 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NPO58_RS11655 (NPO58_11630)	menA	2341264..2342190 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NPO58_RS11660 (NPO58_11635)	hslU	2342257..2343588 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
NPO58_RS11665 (NPO58_11640)	hslV	2343598..2344128 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
NPO58_RS11670 (NPO58_11645)	ftsN	2344221..2345180 (-)	960	WP_000068834.1	cell division protein FtsN	-
NPO58_RS11675 (NPO58_11650)	cytR	2345272..2346297 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NPO58_RS11680 (NPO58_11655)	priA	2346453..2348651 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
NPO58_RS11685 (NPO58_11660)	rpmE	2348854..2349066 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
NPO58_RS11690 (NPO58_11665)	yiiX	2349127..2349735 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
NPO58_RS11695 (NPO58_11670)	metJ	2349795..2350112 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=611735 NPO58_RS11675 WP_000644904.1 2345272..2346297(-) (cytR) [Escherichia coli strain FY26]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=611735 NPO58_RS11675 WP_000644904.1 2345272..2346297(-) (cytR) [Escherichia coli strain FY26]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628