Detailed information NTG0611560

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NO473_RS13150
• Genome accession: NZ_CP101666
• Coordinates: 2707966..2708991 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain M171-1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2702966..2713991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NO473_RS13130	metJ	2704027..2704344 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NO473_RS13135	yiiX	2704528..2705136 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NO473_RS13140	rpmE	2705197..2705409 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NO473_RS13145	priA	2705612..2707810 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
NO473_RS13150	cytR	2707966..2708991 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NO473_RS13155	ftsN	2709083..2710042 (+)	960	WP_000068828.1	cell division protein FtsN	-
NO473_RS13160	hslV	2710135..2710665 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NO473_RS13165	hslU	2710675..2712006 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NO473_RS13170	menA	2712073..2712999 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NO473_RS13175	rraA	2713092..2713577 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NO473_RS13180	zapB	2713662..2713907 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=611560 NO473_RS13150 WP_000644904.1 2707966..2708991(+) (cytR) [Escherichia coli strain M171-1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=611560 NO473_RS13150 WP_000644904.1 2707966..2708991(+) (cytR) [Escherichia coli strain M171-1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628