Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   LFR23_RS05785 Genome accession   NZ_CP084480
Coordinates   1209231..1210139 (+) Length   302 a.a.
NCBI ID   WP_002492577.1    Uniprot ID   A0A853V1B3
Organism   Staphylococcus lugdunensis strain RMLUG1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1204231..1215139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LFR23_RS05765 (LFR23_05770) wecB 1205248..1206387 (+) 1140 WP_037540933.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -
  LFR23_RS05770 (LFR23_05775) - 1206573..1208021 (-) 1449 WP_267263019.1 alkaline phosphatase -
  LFR23_RS12775 - 1208240..1208344 (+) 105 Protein_1128 hypothetical protein -
  LFR23_RS05780 (LFR23_05785) braR 1208560..1209225 (+) 666 WP_002492581.1 DNA-binding response regulator Regulator
  LFR23_RS05785 (LFR23_05790) braS 1209231..1210139 (+) 909 WP_002492577.1 sensor histidine kinase Regulator
  LFR23_RS05790 (LFR23_05795) - 1210245..1210994 (+) 750 WP_002492476.1 ABC transporter ATP-binding protein -
  LFR23_RS05795 (LFR23_05800) - 1211017..1212978 (+) 1962 WP_225306504.1 FtsX-like permease family protein -
  LFR23_RS05800 (LFR23_05805) - 1213020..1213469 (+) 450 WP_002492528.1 hypothetical protein -
  LFR23_RS05805 (LFR23_05810) - 1213556..1214035 (+) 480 WP_002492544.1 DUF4064 domain-containing protein -
  LFR23_RS05810 (LFR23_05815) - 1214308..1214982 (+) 675 WP_002492473.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 302 a.a.        Molecular weight: 35304.89 Da        Isoelectric Point: 7.1983

>NTDB_id=611405 LFR23_RS05785 WP_002492577.1 1209231..1210139(+) (braS) [Staphylococcus lugdunensis strain RMLUG1]
MTTFFDTIKRELIITAMALVVFLVIFFVFNLPYYAYFLGSGIMLFIMVIYWFIALSEFKKQQRLTSQLKVLEQEVQQLKS
KQTQYQNDIENYFLTWVHQIKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNHETDMSFTKVTVNELV
KPLIMKYSIQFIDQHTRIHYDRSDEEVLTDVQWASIMIEQILNNALKYARGKDIWLTFDKDINVLSIKDNGVGISTADLP
KIFDKGYSGYNGRLNEQSTGIGLFIVKHISNHIHHQVEVDSKLGQGTTFKIYFPKVDKMNEL

Nucleotide


Download         Length: 909 bp        

>NTDB_id=611405 LFR23_RS05785 WP_002492577.1 1209231..1210139(+) (braS) [Staphylococcus lugdunensis strain RMLUG1]
ATGACAACGTTCTTTGACACAATTAAGCGTGAACTGATCATCACCGCAATGGCATTAGTTGTTTTTTTAGTAATCTTTTT
TGTCTTTAATTTGCCCTACTATGCCTACTTTTTAGGAAGTGGCATTATGTTATTTATCATGGTTATTTATTGGTTTATCG
CATTGAGCGAGTTTAAAAAGCAACAACGATTGACATCTCAACTTAAAGTGTTAGAACAAGAAGTTCAACAATTAAAAAGC
AAGCAAACGCAATACCAAAATGATATCGAAAACTATTTTCTTACTTGGGTACATCAAATTAAAACACCGATCACTGCCTC
CAAACTGTTACTTGAACGTAATGAAGACAATGTTGTTAACCGTGTCCGACAAGAAATAATTCAAATTGATAATTACACTA
GTTTAGCTTTAAGCTATTTAAAATTAATGAATCATGAAACTGACATGAGCTTTACTAAAGTAACTGTCAATGAATTGGTT
AAGCCATTAATAATGAAATATTCAATACAATTTATCGATCAACATACACGTATACATTATGATCGCTCAGATGAAGAAGT
ATTGACAGATGTGCAATGGGCTTCCATTATGATAGAGCAAATTTTGAATAATGCACTAAAATATGCTCGTGGTAAAGATA
TTTGGTTAACTTTTGATAAAGATATAAACGTACTTTCTATCAAAGATAATGGTGTGGGTATTAGTACTGCTGATTTACCG
AAAATTTTTGATAAAGGTTATTCTGGTTATAATGGTCGTTTAAATGAGCAATCAACTGGTATTGGATTGTTTATAGTAAA
ACATATATCGAATCATATTCATCATCAAGTAGAAGTAGATTCTAAGCTAGGTCAAGGTACGACATTTAAGATTTATTTTC
CTAAGGTAGATAAAATGAATGAACTATAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(196-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A853V1B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

58.904

96.689

0.57