Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   LE166_RS11685 Genome accession   NZ_CP084437
Coordinates   2414870..2415778 (+) Length   302 a.a.
NCBI ID   WP_002492577.1    Uniprot ID   A0A853V1B3
Organism   Staphylococcus lugdunensis strain RMLUG3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2409870..2420778
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LE166_RS11665 (LE166_11680) wecB 2410887..2412026 (+) 1140 WP_037540933.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) -
  LE166_RS11670 (LE166_11685) - 2412212..2413660 (-) 1449 WP_002478511.1 alkaline phosphatase -
  LE166_RS12420 - 2413879..2413974 (+) 96 Protein_2254 hypothetical protein -
  LE166_RS11680 (LE166_11695) braR 2414199..2414864 (+) 666 WP_002492581.1 response regulator transcription factor Regulator
  LE166_RS11685 (LE166_11700) braS 2414870..2415778 (+) 909 WP_002492577.1 sensor histidine kinase Regulator
  LE166_RS11690 (LE166_11705) - 2415884..2416633 (+) 750 WP_002492476.1 ABC transporter ATP-binding protein -
  LE166_RS11695 (LE166_11710) - 2416656..2418617 (+) 1962 WP_225306504.1 ABC transporter permease -
  LE166_RS11700 (LE166_11715) - 2418659..2419108 (+) 450 WP_002492528.1 hypothetical protein -
  LE166_RS11705 (LE166_11720) - 2419195..2419674 (+) 480 WP_002492544.1 DUF4064 domain-containing protein -
  LE166_RS11710 (LE166_11725) - 2419947..2420621 (+) 675 WP_002492473.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 302 a.a.        Molecular weight: 35304.89 Da        Isoelectric Point: 7.1983

>NTDB_id=611293 LE166_RS11685 WP_002492577.1 2414870..2415778(+) (braS) [Staphylococcus lugdunensis strain RMLUG3]
MTTFFDTIKRELIITAMALVVFLVIFFVFNLPYYAYFLGSGIMLFIMVIYWFIALSEFKKQQRLTSQLKVLEQEVQQLKS
KQTQYQNDIENYFLTWVHQIKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNHETDMSFTKVTVNELV
KPLIMKYSIQFIDQHTRIHYDRSDEEVLTDVQWASIMIEQILNNALKYARGKDIWLTFDKDINVLSIKDNGVGISTADLP
KIFDKGYSGYNGRLNEQSTGIGLFIVKHISNHIHHQVEVDSKLGQGTTFKIYFPKVDKMNEL

Nucleotide


Download         Length: 909 bp        

>NTDB_id=611293 LE166_RS11685 WP_002492577.1 2414870..2415778(+) (braS) [Staphylococcus lugdunensis strain RMLUG3]
ATGACAACGTTCTTTGACACAATTAAGCGTGAACTGATCATCACCGCAATGGCATTAGTTGTTTTTTTAGTAATCTTTTT
TGTCTTTAATTTGCCCTACTATGCCTACTTTTTAGGAAGTGGCATTATGTTATTTATCATGGTTATTTATTGGTTTATCG
CATTGAGCGAGTTTAAAAAGCAACAACGATTGACATCTCAACTTAAAGTGTTAGAACAAGAAGTTCAACAATTAAAAAGC
AAGCAAACGCAATACCAAAATGATATCGAAAACTATTTTCTTACTTGGGTACATCAAATTAAAACACCGATCACTGCCTC
CAAACTGTTACTTGAACGTAATGAAGACAATGTTGTTAACCGTGTCCGACAAGAAATAATTCAAATTGATAATTACACTA
GTTTAGCTTTAAGCTATTTAAAATTAATGAATCATGAAACTGACATGAGCTTTACTAAAGTAACTGTCAATGAATTGGTT
AAGCCATTAATAATGAAATATTCAATACAATTTATCGATCAACATACACGTATACATTATGATCGCTCAGATGAAGAAGT
ATTGACAGATGTGCAATGGGCTTCCATTATGATAGAGCAAATTTTGAATAATGCACTAAAATATGCTCGTGGTAAAGATA
TTTGGTTAACTTTTGATAAAGATATAAACGTACTTTCTATCAAAGATAATGGTGTGGGTATTAGTACTGCTGATTTACCG
AAAATTTTTGATAAAGGTTATTCTGGTTATAATGGTCGTTTAAATGAGCAATCAACTGGTATTGGATTGTTTATAGTAAA
ACATATATCGAATCATATTCATCATCAAGTAGAAGTAGATTCTAAGCTAGGTCAAGGTACGACATTTAAGATTTATTTTC
CTAAGGTAGATAAAATGAATGAACTATAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(196-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A853V1B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

58.904

96.689

0.57