Detailed information NTG0610962

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: NON14_RS04925
• Genome accession: NZ_CP101642
• Coordinates: 989683..991995 (+)
• Length: 770 a.a.
• NCBI ID: WP_112217744.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain HRB10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 984683..996995

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NON14_RS04890 (NON14_04890)	-	984755..985492 (+)	738	WP_112217749.1	DUF3324 domain-containing protein	-
NON14_RS04895 (NON14_04895)	-	985482..985877 (+)	396	WP_112217748.1	LPXTG cell wall anchor domain-containing protein	-
NON14_RS04900 (NON14_04900)	-	985867..986133 (+)	267	WP_112217747.1	hypothetical protein	-
NON14_RS04905 (NON14_04905)	-	986224..987702 (+)	1479	WP_409043705.1	WxL domain-containing protein	-
NON14_RS04910 (NON14_04910)	-	987752..988078 (-)	327	WP_016265359.1	heavy metal-binding domain-containing protein	-
NON14_RS04915 (NON14_04915)	-	988095..988460 (-)	366	WP_112217745.1	DUF1304 domain-containing protein	-
NON14_RS04920 (NON14_04920)	galE	988546..989538 (-)	993	WP_409043706.1	UDP-glucose 4-epimerase GalE	-
NON14_RS04925 (NON14_04925)	recJ	989683..991995 (+)	2313	WP_112217744.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
NON14_RS04930 (NON14_04930)	-	992019..992537 (+)	519	WP_096584669.1	adenine phosphoribosyltransferase	-
NON14_RS04935 (NON14_04935)	dinR/lexA	992630..993244 (-)	615	WP_011374972.1	transcriptional repressor LexA	Regulator
NON14_RS04940 (NON14_04940)	-	993379..993621 (+)	243	WP_016265356.1	DUF896 domain-containing protein	-
NON14_RS04945 (NON14_04945)	-	993702..993932 (+)	231	WP_011374970.1	YneF family protein	-
NON14_RS04950 (NON14_04950)	-	994074..995819 (+)	1746	WP_099947393.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 770 a.a.
• Molecular weight: 84912.78 Da
• Isoelectric Point: 4.5280

>NTDB_id=610962 NON14_RS04925 WP_112217744.1 989683..991995(+) (recJ) [Latilactobacillus sakei strain HRB10]
MEAQYEWQLKPVPTEDELQTITKDNPLPKAAAQLLWQRGLRDAEQINDFMNPNVGQLHDPYALHDMQKAIDRIQEAIVNG
EKITIYGDYDADGITSTTLMKETLDDLGADVEVYVPNRFKDGYGPNLEAYKRLIENGTQLIVTVDNGVSGLEPIAYAQEH
GVDVVVTDHHELPAELPNAVAIVHPRHPEGEYPFGELCGVGVAFKVATALLEEIPYDKLDLAAIGTVCDIVPLVDENRTL
VSLGLQQLQNTDRPGLVALCQSAGLEQATLDATNIGFGIGPRLNAIGRLGDATLGVQLLTTLDDEEAVEQAQFIEQQNKK
RQGLVKEITEMAMTIAETPENQASATLVIAHEGWHEGVLGIVASHVVEQTGKPTLVLTIDPETGLAKGSGRSVTAFHLFK
ALDAHRELLVHFGGHHMAVGLTAKVDQLALIQTAMNEYAQVNQLDLTGRQPLPVDLALTLADITPDLYQALQQLAPFGSD
NPEPLIELSAPQLADVKQIGADQKHLKMMAVDQQQQLAVLAFNKGALMPDLTAAEDVKLVGSLSENTWRGQTTLQLMVKD
LATSGQVVLDQRSNRLTKQLFQSTGDYVFFNDKMREQLQSYLPAGSQALLATDEQVATSQELIVVDEPADLTAFEQFYQQ
QQAAKLSLIFYAKHSAYLEGMPTKQQFATFLVYLRKHPNIEKARLAELAAYLKLQLPLMIFMLQVFFDLGFVRIERGLIT
AELQPEKHALESAPSYQKRLAKIEMEKQLVYSTFTEVKDWLATLPAVANR

Nucleotide

• Length: 2313 bp

>NTDB_id=610962 NON14_RS04925 WP_112217744.1 989683..991995(+) (recJ) [Latilactobacillus sakei strain HRB10]
TTGGAAGCACAATATGAATGGCAATTAAAACCAGTACCAACTGAAGATGAATTACAAACAATTACAAAAGACAATCCGCT
ACCTAAGGCTGCGGCCCAACTTTTGTGGCAACGTGGCTTGCGGGATGCAGAGCAGATCAATGATTTTATGAATCCCAATG
TCGGTCAACTTCACGATCCATACGCTTTGCATGATATGCAAAAGGCGATTGATCGGATTCAAGAAGCGATTGTGAATGGC
GAAAAAATTACGATTTATGGCGATTATGACGCGGACGGGATTACTAGTACGACTTTAATGAAGGAAACCTTAGATGACTT
AGGTGCCGATGTTGAAGTCTATGTGCCTAACCGTTTTAAGGATGGCTATGGGCCTAATTTAGAAGCTTACAAGCGCTTGA
TTGAAAATGGCACCCAATTAATTGTGACCGTTGATAACGGGGTGAGCGGCCTAGAACCAATCGCTTACGCGCAAGAACAC
GGTGTTGACGTGGTTGTGACCGATCACCATGAATTACCAGCAGAATTACCAAACGCAGTAGCGATTGTGCATCCTAGACA
TCCAGAGGGGGAATATCCTTTTGGCGAACTCTGTGGGGTCGGTGTGGCGTTTAAAGTGGCGACTGCTTTATTAGAAGAGA
TTCCTTACGATAAATTAGATTTAGCTGCAATCGGGACGGTTTGTGATATCGTCCCCTTAGTCGATGAAAATCGGACGTTG
GTTAGCTTAGGCTTACAACAATTACAAAATACCGATCGACCAGGTTTGGTCGCATTGTGTCAATCAGCTGGCTTAGAACA
AGCGACACTAGATGCTACTAACATTGGGTTTGGGATTGGTCCCCGTTTAAACGCAATTGGTCGTTTAGGTGATGCGACCC
TTGGTGTGCAATTGTTGACGACGCTTGATGACGAAGAAGCAGTCGAACAGGCCCAATTTATTGAACAACAAAATAAAAAA
CGCCAAGGTCTGGTAAAGGAAATTACGGAAATGGCAATGACAATTGCTGAAACACCGGAAAACCAAGCGAGTGCCACCTT
AGTTATTGCCCACGAAGGTTGGCATGAAGGGGTTCTAGGGATTGTGGCTAGTCATGTTGTTGAACAGACCGGTAAACCAA
CCTTAGTCTTGACGATTGACCCGGAAACTGGTTTAGCTAAAGGCTCTGGCCGTAGTGTGACAGCTTTCCATTTATTTAAA
GCGTTAGATGCCCACCGTGAATTATTGGTTCATTTTGGTGGCCATCACATGGCAGTTGGCTTGACTGCTAAGGTTGATCA
ATTAGCGCTGATTCAAACTGCAATGAACGAGTATGCGCAAGTTAATCAGTTAGATTTAACAGGACGCCAACCATTACCAG
TTGATTTGGCGCTGACGTTAGCTGATATTACGCCTGATTTATATCAAGCATTGCAACAACTGGCACCTTTTGGCAGTGAT
AATCCAGAACCGTTGATTGAACTTAGCGCGCCCCAGTTGGCCGATGTCAAACAAATCGGTGCTGATCAGAAGCATTTGAA
GATGATGGCGGTCGATCAACAACAACAATTAGCGGTTTTAGCTTTCAATAAAGGGGCTTTGATGCCCGATTTAACTGCCG
CTGAAGATGTGAAATTAGTCGGGAGTTTGAGTGAGAATACTTGGCGTGGCCAGACGACGTTGCAATTAATGGTAAAAGAC
CTTGCTACAAGTGGGCAAGTCGTACTTGATCAACGTAGCAATCGTCTGACGAAGCAATTATTCCAATCAACAGGCGACTA
CGTCTTTTTTAATGATAAAATGCGCGAGCAACTGCAGTCTTATTTACCGGCAGGGAGTCAGGCGCTGTTAGCGACCGATG
AACAAGTTGCTACTAGCCAAGAGCTAATTGTAGTTGATGAACCGGCTGATTTAACTGCTTTTGAACAATTTTATCAACAA
CAACAGGCCGCTAAATTAAGTTTAATTTTTTACGCCAAACACTCTGCTTACTTAGAAGGAATGCCGACAAAACAACAGTT
TGCGACTTTCTTAGTCTACTTGCGGAAACATCCAAATATTGAAAAAGCGCGGTTAGCAGAATTAGCAGCGTATTTAAAAT
TACAATTACCGTTAATGATTTTCATGTTGCAGGTGTTTTTTGACCTCGGATTTGTTAGAATAGAACGTGGTCTGATTACG
GCCGAGTTACAACCTGAAAAGCATGCACTGGAAAGTGCACCAAGTTATCAAAAACGATTAGCTAAAATTGAAATGGAAAA
ACAGCTTGTTTATTCAACCTTTACCGAGGTGAAAGACTGGCTAGCAACTCTCCCAGCAGTAGCAAATCGCTAA

Domains

Predicted by InterProScan.

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-761)

• DHH family (DHH) (82-226)

• RecJ OB domain (RecJ_OB) (454-560)

• DHHA1 domain (DHHA1) (316-437)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	40.604	98.831	0.401
recJ	Bacillus subtilis subsp. subtilis str. 168	37.371	100	0.377