Detailed information NTG0061084

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BASU_RS02310
• Genome accession: NC_022081
• Coordinates: 398392..399540 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis UCMB5113
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 393392..404540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BASU_RS02290 (BASU_0355)	-	393813..394496 (-)	684	WP_020955320.1	ATP-binding cassette domain-containing protein	-
BASU_RS02295 (BASU_0356)	-	394511..395923 (-)	1413	WP_020955321.1	FtsX-like permease family protein	-
BASU_RS02300 (BASU_0357)	-	396136..396819 (+)	684	WP_007410267.1	response regulator transcription factor	-
BASU_RS02305 (BASU_0358)	-	396806..398239 (+)	1434	WP_020955322.1	ATP-binding protein	-
BASU_RS02310 (BASU_0359)	rapC	398392..399540 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
BASU_RS02315 (BASU_0360)	phrC	399524..399643 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BASU_RS19555	-	399791..399886 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
BASU_RS02320 (BASU_0361)	-	399981..401345 (-)	1365	WP_020955323.1	aspartate kinase	-
BASU_RS02325 (BASU_0363)	ceuB	401759..402712 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
BASU_RS02330 (BASU_0364)	-	402702..403649 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
BASU_RS02335 (BASU_0365)	-	403643..404401 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=61084 BASU_RS02310 WP_007410270.1 398392..399540(+) (rapC) [Bacillus velezensis UCMB5113]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=61084 BASU_RS02310 WP_007410270.1 398392..399540(+) (rapC) [Bacillus velezensis UCMB5113]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTATTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568