Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   EL271_RS02690 Genome accession   NZ_AP018937
Coordinates   492982..493248 (+) Length   88 a.a.
NCBI ID   WP_001808618.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain HU-OH     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 487982..498248
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL271_RS02670 (SPOH_0488) - 488245..488754 (+) 510 WP_000619952.1 GNAT family N-acetyltransferase -
  EL271_RS02675 (SPOH_0489) pheT 488831..491236 (+) 2406 WP_000961504.1 phenylalanine--tRNA ligase subunit beta -
  EL271_RS02680 (SPOH_0490) - 491304..492305 (-) 1002 WP_000597980.1 endonuclease/exonuclease/phosphatase family protein -
  EL271_RS02685 - 492453..492856 (+) 404 Protein_496 helix-turn-helix domain-containing protein -
  EL271_RS02690 (SPOH_0492) HI0659 492982..493248 (+) 267 WP_001808618.1 helix-turn-helix domain-containing protein Machinery gene
  EL271_RS02695 (SPOH_0493) metE 493509..495758 (+) 2250 WP_000108202.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  EL271_RS02700 (SPOH_0494) metF 495822..496688 (+) 867 WP_000089968.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  EL271_RS12130 - 496870..497139 (-) 270 WP_001808932.1 hypothetical protein -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9622.15 Da        Isoelectric Point: 4.4893

>NTDB_id=61083 EL271_RS02690 WP_001808618.1 492982..493248(+) (HI0659) [Streptococcus pneumoniae strain HU-OH]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=61083 EL271_RS02690 WP_001808618.1 492982..493248(+) (HI0659) [Streptococcus pneumoniae strain HU-OH]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534

Multiple sequence alignment